Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 AC008741.2-201ENST00000612792 3115 ntBASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 AP001582.1-201ENST00000525856 295 ntBASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 AC068587.3-201ENST00000526613 355 ntBASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 SAMD11P1-201ENST00000571429 661 ntBASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 BTNL10-201ENST00000595971 695 ntBASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 AP005019.2-201ENST00000615104 511 ntBASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 BX539320.1-201ENST00000623759 877 ntBASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 PPT1-215ENST00000641471 2368 ntBASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.59□□□□□ -0.07
ARHGEF39Q8N4T4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.58□□□□□ -0.07
ARHGEF39Q8N4T4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
ARHGEF39Q8N4T4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ARHGEF39Q8N4T4 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
ARHGEF39Q8N4T4 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
ARHGEF39Q8N4T4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 AL645937.2-201ENST00000396808 931 ntBASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 BAATP1-201ENST00000412284 1225 ntBASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 AC004066.1-201ENST00000502488 802 ntBASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 SLC25A47P1-201ENST00000531577 414 ntBASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 TDH-203ENST00000531764 1110 ntBASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 AC233724.13-201ENST00000598383 410 ntBASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 AC132872.4-202ENST00000622924 2756 ntBASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ARHGEF39Q8N4T4 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms