Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 AC011477.6-201ENST00000604980 1927 ntBASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 MIR648-201ENST00000385046 94 ntBASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 MTX1P1-201ENST00000440904 838 ntBASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 SCARNA20.5-201ENST00000516991 142 ntBASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 COG4-212ENST00000564653 590 ntTSL 5 BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 RN7SL48P-201ENST00000579283 293 ntBASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 RETN-203ENST00000629642 400 ntTSL 5 BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 ACTBP8-201ENST00000403258 1108 ntBASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 AP006547.1-201ENST00000563435 692 ntBASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
SYNPOQ8N3V7 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms