Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC144831.1-201ENST00000573312 2656 ntBASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 AC138035.3-201ENST00000622706 2791 ntBASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 AC126177.1-201ENST00000547829 2218 ntBASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 AP002414.2-201ENST00000591780 3365 ntBASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 AC087499.6-201ENST00000411576 835 ntBASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 MTND4LP12-201ENST00000448237 295 ntBASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 AC123567.1-201ENST00000548294 1261 ntBASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.35■□□□□ 0.21
SCUBE3Q8IX30 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 MYCLP2-201ENST00000449268 967 ntBASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 CRB3P1-201ENST00000449338 276 ntBASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCUBE3Q8IX30 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.33■□□□□ 0.21
SCUBE3Q8IX30 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.33■□□□□ 0.21
SCUBE3Q8IX30 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SCUBE3Q8IX30 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
SCUBE3Q8IX30 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
SCUBE3Q8IX30 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SCUBE3Q8IX30 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.33■□□□□ 0.21
SCUBE3Q8IX30 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms