Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 AL080243.2-201ENST00000418783 582 ntBASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 AC069262.1-201ENST00000539058 672 ntBASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 CICP11-201ENST00000434745 2827 ntBASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LINC00346Q8IVM7 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 AC007686.3-201ENST00000619017 3487 ntBASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 MIR1233-2-201ENST00000408138 82 ntBASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 MIR1233-1-201ENST00000408722 82 ntBASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 TSEN15P1-201ENST00000423257 515 ntBASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms