Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.71□□□□□ -0.21
LYSMD2Q8IV50 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD2Q8IV50 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD2Q8IV50 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
LYSMD2Q8IV50 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD2Q8IV50 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
LYSMD2Q8IV50 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.71□□□□□ -0.22
LYSMD2Q8IV50 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LYSMD2Q8IV50 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.71□□□□□ -0.22
LYSMD2Q8IV50 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
LYSMD2Q8IV50 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LYSMD2Q8IV50 CICP11-201ENST00000434745 2827 ntBASIC13.71□□□□□ -0.22
LYSMD2Q8IV50 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
LYSMD2Q8IV50 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LYSMD2Q8IV50 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LYSMD2Q8IV50 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LYSMD2Q8IV50 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.71□□□□□ -0.22
LYSMD2Q8IV50 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
LYSMD2Q8IV50 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LYSMD2Q8IV50 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LYSMD2Q8IV50 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.71□□□□□ -0.22
LYSMD2Q8IV50 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 KRT16P4-201ENST00000453883 522 ntBASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 AL139288.1-201ENST00000623748 933 ntBASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD2Q8IV50 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 AC129492.6-201ENST00000611383 1305 ntBASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 MIR4313-201ENST00000580760 101 ntBASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms