Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.92□□□□□ -0.18
LRRC28Q86X40 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.92□□□□□ -0.18
LRRC28Q86X40 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.92□□□□□ -0.18
LRRC28Q86X40 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.92□□□□□ -0.18
LRRC28Q86X40 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.92□□□□□ -0.18
LRRC28Q86X40 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.92□□□□□ -0.18
LRRC28Q86X40 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.92□□□□□ -0.18
LRRC28Q86X40 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRC28Q86X40 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
LRRC28Q86X40 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
LRRC28Q86X40 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.92□□□□□ -0.18
LRRC28Q86X40 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
LRRC28Q86X40 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
LRRC28Q86X40 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRC28Q86X40 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.92□□□□□ -0.18
LRRC28Q86X40 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRC28Q86X40 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRC28Q86X40 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LRRC28Q86X40 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRC28Q86X40 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRC28Q86X40 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
LRRC28Q86X40 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRC28Q86X40 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRC28Q86X40 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRC28Q86X40 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LRRC28Q86X40 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.91□□□□□ -0.18
LRRC28Q86X40 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.91□□□□□ -0.18
LRRC28Q86X40 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRC28Q86X40 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRC28Q86X40 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRC28Q86X40 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.91□□□□□ -0.18
LRRC28Q86X40 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LRRC28Q86X40 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRC28Q86X40 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRC28Q86X40 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.91□□□□□ -0.18
LRRC28Q86X40 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.91□□□□□ -0.18
LRRC28Q86X40 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRC28Q86X40 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
LRRC28Q86X40 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.91□□□□□ -0.18
LRRC28Q86X40 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.91□□□□□ -0.18
LRRC28Q86X40 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRC28Q86X40 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRC28Q86X40 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.91□□□□□ -0.18
LRRC28Q86X40 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.91□□□□□ -0.18
LRRC28Q86X40 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.91□□□□□ -0.18
LRRC28Q86X40 AC005237.2-201ENST00000434368 219 ntBASIC13.91□□□□□ -0.18
LRRC28Q86X40 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.91□□□□□ -0.18
LRRC28Q86X40 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRC28Q86X40 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRRC28Q86X40 KRT8P23-201ENST00000560090 1207 ntBASIC13.91□□□□□ -0.18
LRRC28Q86X40 AL365330.1-201ENST00000607459 531 ntBASIC13.91□□□□□ -0.18
LRRC28Q86X40 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRRC28Q86X40 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRC28Q86X40 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRC28Q86X40 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRRC28Q86X40 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRC28Q86X40 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRC28Q86X40 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.91□□□□□ -0.18
LRRC28Q86X40 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.91□□□□□ -0.18
LRRC28Q86X40 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
LRRC28Q86X40 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRC28Q86X40 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRC28Q86X40 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.91□□□□□ -0.18
LRRC28Q86X40 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRRC28Q86X40 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LRRC28Q86X40 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRC28Q86X40 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRRC28Q86X40 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRC28Q86X40 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRC28Q86X40 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
LRRC28Q86X40 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRC28Q86X40 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRC28Q86X40 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRC28Q86X40 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRC28Q86X40 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
LRRC28Q86X40 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC28Q86X40 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.9□□□□□ -0.18
LRRC28Q86X40 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC28Q86X40 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC28Q86X40 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
LRRC28Q86X40 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC28Q86X40 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LRRC28Q86X40 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC28Q86X40 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC28Q86X40 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
LRRC28Q86X40 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
LRRC28Q86X40 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.9□□□□□ -0.18
LRRC28Q86X40 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.9□□□□□ -0.18
LRRC28Q86X40 AC140479.7-201ENST00000636301 2332 ntBASIC13.9□□□□□ -0.18
LRRC28Q86X40 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC28Q86X40 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LRRC28Q86X40 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC28Q86X40 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC28Q86X40 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC28Q86X40 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.9□□□□□ -0.18
LRRC28Q86X40 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.9□□□□□ -0.18
LRRC28Q86X40 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.9□□□□□ -0.18
LRRC28Q86X40 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.9□□□□□ -0.18
LRRC28Q86X40 KRT18P34-201ENST00000488218 1270 ntBASIC13.9□□□□□ -0.18
LRRC28Q86X40 IGHV3-62-201ENST00000520057 340 ntBASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms