Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBE3BQ7Z3V4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBE3BQ7Z3V4 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBE3BQ7Z3V4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBE3BQ7Z3V4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
UBE3BQ7Z3V4 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC19.25■□□□□ 0.67
UBE3BQ7Z3V4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBE3BQ7Z3V4 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC19.25■□□□□ 0.67
UBE3BQ7Z3V4 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBE3BQ7Z3V4 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBE3BQ7Z3V4 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC19.25■□□□□ 0.67
UBE3BQ7Z3V4 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC19.25■□□□□ 0.67
UBE3BQ7Z3V4 AC114812.1-204ENST00000449669 728 ntBASIC19.25■□□□□ 0.67
UBE3BQ7Z3V4 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
UBE3BQ7Z3V4 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
UBE3BQ7Z3V4 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC19.25■□□□□ 0.67
UBE3BQ7Z3V4 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC19.25■□□□□ 0.67
UBE3BQ7Z3V4 SAMD11P1-201ENST00000571429 661 ntBASIC19.25■□□□□ 0.67
UBE3BQ7Z3V4 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC19.25■□□□□ 0.67
UBE3BQ7Z3V4 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
UBE3BQ7Z3V4 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBE3BQ7Z3V4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
UBE3BQ7Z3V4 CICP11-201ENST00000434745 2827 ntBASIC19.25■□□□□ 0.67
UBE3BQ7Z3V4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.25■□□□□ 0.67
UBE3BQ7Z3V4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBE3BQ7Z3V4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC19.25■□□□□ 0.67
UBE3BQ7Z3V4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBE3BQ7Z3V4 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBE3BQ7Z3V4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBE3BQ7Z3V4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
UBE3BQ7Z3V4 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBE3BQ7Z3V4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
UBE3BQ7Z3V4 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC19.24■□□□□ 0.67
UBE3BQ7Z3V4 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC19.24■□□□□ 0.67
UBE3BQ7Z3V4 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBE3BQ7Z3V4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.24■□□□□ 0.67
UBE3BQ7Z3V4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBE3BQ7Z3V4 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBE3BQ7Z3V4 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBE3BQ7Z3V4 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
UBE3BQ7Z3V4 GUK1-206ENST00000366723 845 ntTSL 5 BASIC19.24■□□□□ 0.67
UBE3BQ7Z3V4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
UBE3BQ7Z3V4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
UBE3BQ7Z3V4 RPL5P21-201ENST00000404620 815 ntBASIC19.24■□□□□ 0.67
UBE3BQ7Z3V4 AL139094.1-201ENST00000405549 1188 ntBASIC19.24■□□□□ 0.67
UBE3BQ7Z3V4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC19.24■□□□□ 0.67
UBE3BQ7Z3V4 AC078819.1-201ENST00000547454 765 ntBASIC19.24■□□□□ 0.67
UBE3BQ7Z3V4 AC012085.1-201ENST00000548270 765 ntBASIC19.24■□□□□ 0.67
UBE3BQ7Z3V4 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC19.24■□□□□ 0.67
UBE3BQ7Z3V4 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC19.24■□□□□ 0.67
UBE3BQ7Z3V4 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC19.24■□□□□ 0.67
UBE3BQ7Z3V4 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBE3BQ7Z3V4 TECR-220ENST00000600083 1204 ntTSL 2 BASIC19.24■□□□□ 0.67
UBE3BQ7Z3V4 MIR6799-201ENST00000620297 69 ntBASIC19.24■□□□□ 0.67
UBE3BQ7Z3V4 AL645728.2-202ENST00000641679 227 ntBASIC19.24■□□□□ 0.67
UBE3BQ7Z3V4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.24■□□□□ 0.67
UBE3BQ7Z3V4 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBE3BQ7Z3V4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBE3BQ7Z3V4 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBE3BQ7Z3V4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
UBE3BQ7Z3V4 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBE3BQ7Z3V4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBE3BQ7Z3V4 FOS-202ENST00000535987 1402 ntTSL 2 BASIC19.24■□□□□ 0.67
UBE3BQ7Z3V4 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBE3BQ7Z3V4 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBE3BQ7Z3V4 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.24■□□□□ 0.67
UBE3BQ7Z3V4 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBE3BQ7Z3V4 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC19.23■□□□□ 0.67
UBE3BQ7Z3V4 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC19.23■□□□□ 0.67
UBE3BQ7Z3V4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC19.23■□□□□ 0.67
UBE3BQ7Z3V4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBE3BQ7Z3V4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC19.23■□□□□ 0.67
UBE3BQ7Z3V4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBE3BQ7Z3V4 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC19.23■□□□□ 0.67
UBE3BQ7Z3V4 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBE3BQ7Z3V4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBE3BQ7Z3V4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBE3BQ7Z3V4 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBE3BQ7Z3V4 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBE3BQ7Z3V4 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBE3BQ7Z3V4 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBE3BQ7Z3V4 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBE3BQ7Z3V4 NUS1P3-201ENST00000423502 862 ntBASIC19.23■□□□□ 0.67
UBE3BQ7Z3V4 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC19.23■□□□□ 0.67
UBE3BQ7Z3V4 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBE3BQ7Z3V4 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBE3BQ7Z3V4 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC19.23■□□□□ 0.67
UBE3BQ7Z3V4 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC19.23■□□□□ 0.67
UBE3BQ7Z3V4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBE3BQ7Z3V4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBE3BQ7Z3V4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBE3BQ7Z3V4 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC19.23■□□□□ 0.67
UBE3BQ7Z3V4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBE3BQ7Z3V4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.23■□□□□ 0.67
UBE3BQ7Z3V4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.23■□□□□ 0.67
UBE3BQ7Z3V4 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBE3BQ7Z3V4 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
UBE3BQ7Z3V4 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
UBE3BQ7Z3V4 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
UBE3BQ7Z3V4 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms