Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.97■□□□□ 0.47
USP50Q70EL3 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP50Q70EL3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP50Q70EL3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP50Q70EL3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP50Q70EL3 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP50Q70EL3 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP50Q70EL3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.96■□□□□ 0.47
USP50Q70EL3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP50Q70EL3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP50Q70EL3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP50Q70EL3 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP50Q70EL3 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP50Q70EL3 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP50Q70EL3 AC078875.1-201ENST00000431907 724 ntBASIC17.96■□□□□ 0.47
USP50Q70EL3 KLF2P1-201ENST00000447438 1042 ntBASIC17.96■□□□□ 0.47
USP50Q70EL3 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC17.96■□□□□ 0.47
USP50Q70EL3 SCARNA21-201ENST00000517026 139 ntBASIC17.96■□□□□ 0.47
USP50Q70EL3 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
USP50Q70EL3 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC17.96■□□□□ 0.47
USP50Q70EL3 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
USP50Q70EL3 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC17.96■□□□□ 0.47
USP50Q70EL3 MIR3677-201ENST00000578964 60 ntBASIC17.96■□□□□ 0.47
USP50Q70EL3 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.96■□□□□ 0.47
USP50Q70EL3 NAT9-220ENST00000582870 896 ntTSL 5 BASIC17.96■□□□□ 0.47
USP50Q70EL3 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC17.96■□□□□ 0.47
USP50Q70EL3 AC007881.3-201ENST00000608897 607 ntBASIC17.96■□□□□ 0.47
USP50Q70EL3 AC127024.7-201ENST00000625101 200 ntBASIC17.96■□□□□ 0.47
USP50Q70EL3 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC17.96■□□□□ 0.47
USP50Q70EL3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.96■□□□□ 0.47
USP50Q70EL3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP50Q70EL3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
USP50Q70EL3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.96■□□□□ 0.47
USP50Q70EL3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP50Q70EL3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP50Q70EL3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP50Q70EL3 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP50Q70EL3 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP50Q70EL3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.96■□□□□ 0.46
USP50Q70EL3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.96■□□□□ 0.46
USP50Q70EL3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP50Q70EL3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.95■□□□□ 0.46
USP50Q70EL3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
USP50Q70EL3 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC17.95■□□□□ 0.46
USP50Q70EL3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP50Q70EL3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP50Q70EL3 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP50Q70EL3 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC17.95■□□□□ 0.46
USP50Q70EL3 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
USP50Q70EL3 AL512430.1-201ENST00000392575 860 ntBASIC17.95■□□□□ 0.46
USP50Q70EL3 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP50Q70EL3 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC17.95■□□□□ 0.46
USP50Q70EL3 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP50Q70EL3 AC009884.2-201ENST00000603110 324 ntBASIC17.95■□□□□ 0.46
USP50Q70EL3 AL109837.1-201ENST00000603272 613 ntBASIC17.95■□□□□ 0.46
USP50Q70EL3 AC138696.2-201ENST00000607376 223 ntBASIC17.95■□□□□ 0.46
USP50Q70EL3 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC17.95■□□□□ 0.46
USP50Q70EL3 AL132780.4-201ENST00000624870 1135 ntBASIC17.95■□□□□ 0.46
USP50Q70EL3 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP50Q70EL3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP50Q70EL3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP50Q70EL3 AC244394.1-201ENST00000435000 1665 ntBASIC17.95■□□□□ 0.46
USP50Q70EL3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP50Q70EL3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP50Q70EL3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
USP50Q70EL3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP50Q70EL3 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP50Q70EL3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP50Q70EL3 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP50Q70EL3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP50Q70EL3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP50Q70EL3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.95■□□□□ 0.46
USP50Q70EL3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP50Q70EL3 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP50Q70EL3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP50Q70EL3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.94■□□□□ 0.46
USP50Q70EL3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.94■□□□□ 0.46
USP50Q70EL3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP50Q70EL3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
USP50Q70EL3 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
USP50Q70EL3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
USP50Q70EL3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.94■□□□□ 0.46
USP50Q70EL3 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
USP50Q70EL3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.94■□□□□ 0.46
USP50Q70EL3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
USP50Q70EL3 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP50Q70EL3 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP50Q70EL3 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
USP50Q70EL3 RPL17P45-201ENST00000586289 509 ntBASIC17.94■□□□□ 0.46
USP50Q70EL3 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
USP50Q70EL3 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC17.94■□□□□ 0.46
USP50Q70EL3 MIR6769A-201ENST00000617340 73 ntBASIC17.94■□□□□ 0.46
USP50Q70EL3 MIR6858-201ENST00000620733 67 ntBASIC17.94■□□□□ 0.46
USP50Q70EL3 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
USP50Q70EL3 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.94■□□□□ 0.46
USP50Q70EL3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP50Q70EL3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
USP50Q70EL3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP50Q70EL3 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.94■□□□□ 0.46
USP50Q70EL3 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms