Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 AC079328.2-201ENST00000561241 3354 ntBASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 AC005229.1-201ENST00000392885 409 ntBASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 TDH-203ENST00000531764 1110 ntBASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 PTP4A1P2-201ENST00000546033 454 ntBASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 AP001063.1-201ENST00000568332 529 ntBASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
H3F3CQ6NXT2 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 AL513523.2-202ENST00000427283 2040 ntBASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 MIR1909-201ENST00000411312 80 ntBASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 KRT43P-201ENST00000434019 910 ntBASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 AP005482.1-201ENST00000563722 1273 ntBASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 AC005252.2-201ENST00000624630 1141 ntBASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms