Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 GNE-204ENST00000539208 2190 ntTSL 2 BASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 AC239868.1-201ENST00000369385 493 ntBASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 AL357563.1-201ENST00000404728 395 ntBASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 HIST2H2BA-201ENST00000412169 381 ntBASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 PSMD4P1-201ENST00000433951 1109 ntBASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 AC093909.3-201ENST00000504783 336 ntBASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 LINC00634-202ENST00000505157 222 ntBASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 MIR5001-201ENST00000580185 100 ntBASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 AC009955.4-201ENST00000597192 544 ntBASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 AL358472.3-201ENST00000608147 415 ntBASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
HIST2H2BCQ6DN03 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 COX20P1-201ENST00000366529 357 ntBASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 AL583805.1-201ENST00000391389 531 ntBASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 AL627422.1-201ENST00000434104 580 ntBASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 KLF2P1-201ENST00000447438 1042 ntBASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 AC025262.2-201ENST00000623975 1056 ntBASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 AC092299.1-201ENST00000632679 757 ntBASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 MBLAC2-202ENST00000514906 1936 ntBASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 CLUHP2-201ENST00000426660 1303 ntBASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST2H2BCQ6DN03 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
HIST2H2BCQ6DN03 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
HIST2H2BCQ6DN03 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
HIST2H2BCQ6DN03 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
HIST2H2BCQ6DN03 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
HIST2H2BCQ6DN03 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
HIST2H2BCQ6DN03 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC13.08□□□□□ -0.32
HIST2H2BCQ6DN03 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
HIST2H2BCQ6DN03 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
HIST2H2BCQ6DN03 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
HIST2H2BCQ6DN03 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.08□□□□□ -0.32
HIST2H2BCQ6DN03 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
HIST2H2BCQ6DN03 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HIST2H2BCQ6DN03 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HIST2H2BCQ6DN03 BAK1P1-201ENST00000317045 636 ntBASIC13.08□□□□□ -0.32
HIST2H2BCQ6DN03 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
HIST2H2BCQ6DN03 HNRNPA1P58-201ENST00000403629 610 ntBASIC13.08□□□□□ -0.32
HIST2H2BCQ6DN03 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC13.08□□□□□ -0.32
HIST2H2BCQ6DN03 VDAC1P1-201ENST00000439229 848 ntBASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 1220.3 ms