Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 AC015656.1-201ENST00000624209 3578 ntBASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 AC041040.2-201ENST00000622926 2899 ntBASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 MRPL3P1-201ENST00000400109 1033 ntBASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 AL139010.1-201ENST00000454878 894 ntBASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 RNA5SP419-201ENST00000515908 135 ntBASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 AL138918.1-201ENST00000568306 659 ntBASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 AC099522.2-201ENST00000607001 744 ntBASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 AC026979.3-201ENST00000607315 403 ntBASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 AC008267.7-201ENST00000624570 1194 ntBASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 KRT8P37-201ENST00000451609 1420 ntBASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 AC104109.2-201ENST00000602919 1418 ntBASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
LCN1P1Q5VSP4 AGAP7P-201ENST00000582299 2062 ntBASIC14.14□□□□□ -0.15
LCN1P1Q5VSP4 AGAP14-201ENST00000624701 2060 ntBASIC14.14□□□□□ -0.15
LCN1P1Q5VSP4 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
LCN1P1Q5VSP4 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.14□□□□□ -0.15
LCN1P1Q5VSP4 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LCN1P1Q5VSP4 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LCN1P1Q5VSP4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LCN1P1Q5VSP4 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LCN1P1Q5VSP4 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.14□□□□□ -0.15
LCN1P1Q5VSP4 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.14□□□□□ -0.15
LCN1P1Q5VSP4 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.14□□□□□ -0.15
LCN1P1Q5VSP4 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LCN1P1Q5VSP4 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LCN1P1Q5VSP4 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LCN1P1Q5VSP4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LCN1P1Q5VSP4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LCN1P1Q5VSP4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LCN1P1Q5VSP4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LCN1P1Q5VSP4 FAM220BP-201ENST00000377689 816 ntBASIC14.14□□□□□ -0.15
LCN1P1Q5VSP4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LCN1P1Q5VSP4 PHKG1P2-201ENST00000457537 863 ntBASIC14.14□□□□□ -0.15
LCN1P1Q5VSP4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.14□□□□□ -0.15
LCN1P1Q5VSP4 AC145285.3-201ENST00000564603 959 ntBASIC14.14□□□□□ -0.15
LCN1P1Q5VSP4 AC027307.2-201ENST00000591252 911 ntBASIC14.14□□□□□ -0.15
LCN1P1Q5VSP4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.14□□□□□ -0.15
LCN1P1Q5VSP4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LCN1P1Q5VSP4 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LCN1P1Q5VSP4 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LCN1P1Q5VSP4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LCN1P1Q5VSP4 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LCN1P1Q5VSP4 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.14□□□□□ -0.15
LCN1P1Q5VSP4 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LCN1P1Q5VSP4 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LCN1P1Q5VSP4 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LCN1P1Q5VSP4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms