Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC19.22■□□□□ 0.67
RC3H1Q5TC82 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RC3H1Q5TC82 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RC3H1Q5TC82 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC19.22■□□□□ 0.67
RC3H1Q5TC82 AC009779.1-201ENST00000551138 283 ntBASIC19.22■□□□□ 0.67
RC3H1Q5TC82 PAM16-211ENST00000575848 518 ntTSL 3 BASIC19.22■□□□□ 0.67
RC3H1Q5TC82 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RC3H1Q5TC82 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC19.22■□□□□ 0.67
RC3H1Q5TC82 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC19.22■□□□□ 0.67
RC3H1Q5TC82 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC19.22■□□□□ 0.67
RC3H1Q5TC82 AC012044.1-201ENST00000603431 297 ntBASIC19.22■□□□□ 0.67
RC3H1Q5TC82 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.22■□□□□ 0.67
RC3H1Q5TC82 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.22■□□□□ 0.67
RC3H1Q5TC82 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RC3H1Q5TC82 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RC3H1Q5TC82 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
RC3H1Q5TC82 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RC3H1Q5TC82 ZBTB45P1-201ENST00000452761 1456 ntBASIC19.22■□□□□ 0.67
RC3H1Q5TC82 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC19.22■□□□□ 0.67
RC3H1Q5TC82 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RC3H1Q5TC82 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RC3H1Q5TC82 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RC3H1Q5TC82 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RC3H1Q5TC82 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RC3H1Q5TC82 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
RC3H1Q5TC82 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RC3H1Q5TC82 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RC3H1Q5TC82 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RC3H1Q5TC82 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RC3H1Q5TC82 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC19.21■□□□□ 0.67
RC3H1Q5TC82 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RC3H1Q5TC82 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RC3H1Q5TC82 HNRNPA1P41-201ENST00000397777 928 ntBASIC19.21■□□□□ 0.67
RC3H1Q5TC82 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.21■□□□□ 0.67
RC3H1Q5TC82 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC19.21■□□□□ 0.67
RC3H1Q5TC82 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC19.21■□□□□ 0.67
RC3H1Q5TC82 VDAC1P1-201ENST00000439229 848 ntBASIC19.21■□□□□ 0.67
RC3H1Q5TC82 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RC3H1Q5TC82 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.21■□□□□ 0.67
RC3H1Q5TC82 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RC3H1Q5TC82 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC19.21■□□□□ 0.67
RC3H1Q5TC82 RTN3P1-201ENST00000536295 711 ntBASIC19.21■□□□□ 0.67
RC3H1Q5TC82 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RC3H1Q5TC82 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RC3H1Q5TC82 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC19.21■□□□□ 0.67
RC3H1Q5TC82 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RC3H1Q5TC82 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RC3H1Q5TC82 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RC3H1Q5TC82 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RC3H1Q5TC82 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RC3H1Q5TC82 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RC3H1Q5TC82 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19.21■□□□□ 0.67
RC3H1Q5TC82 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RC3H1Q5TC82 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 E2F3P2-201ENST00000447755 1422 ntBASIC19.2■□□□□ 0.66
RC3H1Q5TC82 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 AC098935.1-201ENST00000446057 611 ntBASIC19.2■□□□□ 0.66
RC3H1Q5TC82 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 MIR4754-201ENST00000582477 89 ntBASIC19.2■□□□□ 0.66
RC3H1Q5TC82 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 AC008825.2-201ENST00000603374 718 ntBASIC19.2■□□□□ 0.66
RC3H1Q5TC82 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 CDK7-214ENST00000626796 358 ntTSL 5 BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 AC011491.1-203ENST00000637688 543 ntBASIC19.2■□□□□ 0.66
RC3H1Q5TC82 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 AC092364.2-201ENST00000596710 2692 ntBASIC19.2■□□□□ 0.66
RC3H1Q5TC82 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RC3H1Q5TC82 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms