Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CHRFAM7AQ494W8 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 AC087481.3-201ENST00000602886 1894 ntBASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHRFAM7AQ494W8 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.71□□□□□ -0.22
CHRFAM7AQ494W8 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
CHRFAM7AQ494W8 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.71□□□□□ -0.22
CHRFAM7AQ494W8 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CHRFAM7AQ494W8 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
CHRFAM7AQ494W8 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CHRFAM7AQ494W8 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.71□□□□□ -0.22
CHRFAM7AQ494W8 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CHRFAM7AQ494W8 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.71□□□□□ -0.22
CHRFAM7AQ494W8 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CHRFAM7AQ494W8 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.71□□□□□ -0.22
CHRFAM7AQ494W8 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.71□□□□□ -0.22
CHRFAM7AQ494W8 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 AC098614.1-201ENST00000368528 745 ntBASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 AC017083.2-201ENST00000608069 979 ntBASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 AC006486.2-201ENST00000624246 2199 ntBASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms