Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM71Q2Q1W2 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TRIM71Q2Q1W2 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM71Q2Q1W2 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
TRIM71Q2Q1W2 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM71Q2Q1W2 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.79■□□□□ 0.28
TRIM71Q2Q1W2 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.79■□□□□ 0.28
TRIM71Q2Q1W2 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TRIM71Q2Q1W2 AC016700.1-201ENST00000429424 312 ntBASIC16.79■□□□□ 0.28
TRIM71Q2Q1W2 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM71Q2Q1W2 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.79■□□□□ 0.28
TRIM71Q2Q1W2 CHMP1AP1-201ENST00000445563 662 ntBASIC16.79■□□□□ 0.28
TRIM71Q2Q1W2 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.79■□□□□ 0.28
TRIM71Q2Q1W2 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM71Q2Q1W2 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM71Q2Q1W2 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
TRIM71Q2Q1W2 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM71Q2Q1W2 CHMP4BP1-201ENST00000556017 588 ntBASIC16.79■□□□□ 0.28
TRIM71Q2Q1W2 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.79■□□□□ 0.28
TRIM71Q2Q1W2 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.79■□□□□ 0.28
TRIM71Q2Q1W2 OR10B1P-201ENST00000601666 907 ntBASIC16.79■□□□□ 0.28
TRIM71Q2Q1W2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM71Q2Q1W2 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM71Q2Q1W2 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM71Q2Q1W2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM71Q2Q1W2 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM71Q2Q1W2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM71Q2Q1W2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM71Q2Q1W2 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TRIM71Q2Q1W2 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM71Q2Q1W2 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
TRIM71Q2Q1W2 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM71Q2Q1W2 OR6D1P-203ENST00000641209 4860 ntBASIC16.79■□□□□ 0.28
TRIM71Q2Q1W2 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TRIM71Q2Q1W2 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 AC127383.1-201ENST00000444697 1800 ntBASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 NKAIN1P1-201ENST00000435754 582 ntBASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 AC022616.1-201ENST00000518688 554 ntBASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 AC106820.3-201ENST00000561653 397 ntBASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM71Q2Q1W2 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM71Q2Q1W2 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
TRIM71Q2Q1W2 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM71Q2Q1W2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
TRIM71Q2Q1W2 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM71Q2Q1W2 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TRIM71Q2Q1W2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TRIM71Q2Q1W2 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.77■□□□□ 0.28
TRIM71Q2Q1W2 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM71Q2Q1W2 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM71Q2Q1W2 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM71Q2Q1W2 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM71Q2Q1W2 AL662890.1-201ENST00000396818 632 ntBASIC16.77■□□□□ 0.28
TRIM71Q2Q1W2 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TRIM71Q2Q1W2 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.77■□□□□ 0.28
TRIM71Q2Q1W2 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM71Q2Q1W2 HIST2H2BB-201ENST00000449108 381 ntBASIC16.77■□□□□ 0.28
TRIM71Q2Q1W2 EIF4HP1-201ENST00000453115 687 ntBASIC16.77■□□□□ 0.28
TRIM71Q2Q1W2 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM71Q2Q1W2 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.77■□□□□ 0.28
TRIM71Q2Q1W2 AC044849.1-201ENST00000519737 1188 ntBASIC16.77■□□□□ 0.28
TRIM71Q2Q1W2 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.77■□□□□ 0.28
TRIM71Q2Q1W2 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.77■□□□□ 0.28
TRIM71Q2Q1W2 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM71Q2Q1W2 AC005730.2-201ENST00000564549 1184 ntBASIC16.77■□□□□ 0.28
TRIM71Q2Q1W2 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM71Q2Q1W2 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms