Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDH1Q08174 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.02■□□□□ -0
PCDH1Q08174 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCDH1Q08174 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDH1Q08174 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.02■□□□□ -0
PCDH1Q08174 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
PCDH1Q08174 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.02■□□□□ -0
PCDH1Q08174 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.02■□□□□ -0
PCDH1Q08174 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.02■□□□□ -0
PCDH1Q08174 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.02■□□□□ -0
PCDH1Q08174 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
PCDH1Q08174 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCDH1Q08174 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDH1Q08174 DBET-201ENST00000630918 3363 ntBASIC15.02■□□□□ -0
PCDH1Q08174 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
PCDH1Q08174 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.02■□□□□ -0
PCDH1Q08174 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
PCDH1Q08174 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
PCDH1Q08174 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.02■□□□□ -0
PCDH1Q08174 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.02■□□□□ -0
PCDH1Q08174 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDH1Q08174 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDH1Q08174 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDH1Q08174 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.02■□□□□ -0
PCDH1Q08174 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.02■□□□□ -0
PCDH1Q08174 AC055876.3-201ENST00000431496 288 ntBASIC15.02■□□□□ -0
PCDH1Q08174 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.02■□□□□ -0
PCDH1Q08174 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.02■□□□□ -0
PCDH1Q08174 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.02■□□□□ -0
PCDH1Q08174 AC138649.4-201ENST00000612222 287 ntBASIC15.02■□□□□ -0
PCDH1Q08174 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.02□□□□□ -0.01
PCDH1Q08174 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
PCDH1Q08174 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDH1Q08174 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.02□□□□□ -0.01
PCDH1Q08174 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
PCDH1Q08174 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.02□□□□□ -0.01
PCDH1Q08174 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PCDH1Q08174 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PCDH1Q08174 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDH1Q08174 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PCDH1Q08174 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.01□□□□□ -0.01
PCDH1Q08174 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
PCDH1Q08174 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
PCDH1Q08174 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH1Q08174 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.01□□□□□ -0.01
PCDH1Q08174 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH1Q08174 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.01□□□□□ -0.01
PCDH1Q08174 WASH3P-207ENST00000560956 1394 ntBASIC15.01□□□□□ -0.01
PCDH1Q08174 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH1Q08174 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.01□□□□□ -0.01
PCDH1Q08174 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH1Q08174 TCAF2P1-201ENST00000291129 2421 ntBASIC15.01□□□□□ -0.01
PCDH1Q08174 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH1Q08174 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH1Q08174 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH1Q08174 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH1Q08174 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH1Q08174 MIR943-201ENST00000401286 94 ntBASIC15.01□□□□□ -0.01
PCDH1Q08174 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.01□□□□□ -0.01
PCDH1Q08174 PMS2P2-201ENST00000425039 1128 ntBASIC15.01□□□□□ -0.01
PCDH1Q08174 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.01□□□□□ -0.01
PCDH1Q08174 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.01□□□□□ -0.01
PCDH1Q08174 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.01□□□□□ -0.01
PCDH1Q08174 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.01□□□□□ -0.01
PCDH1Q08174 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.01□□□□□ -0.01
PCDH1Q08174 AC011467.4-201ENST00000594891 528 ntBASIC15.01□□□□□ -0.01
PCDH1Q08174 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.01□□□□□ -0.01
PCDH1Q08174 AC023024.2-201ENST00000623561 1993 ntBASIC15.01□□□□□ -0.01
PCDH1Q08174 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.01□□□□□ -0.01
PCDH1Q08174 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH1Q08174 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH1Q08174 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
PCDH1Q08174 LINC02228-204ENST00000642115 2962 ntBASIC15.01□□□□□ -0.01
PCDH1Q08174 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH1Q08174 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.01□□□□□ -0.01
PCDH1Q08174 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH1Q08174 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH1Q08174 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.01□□□□□ -0.01
PCDH1Q08174 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH1Q08174 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH1Q08174 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.01□□□□□ -0.01
PCDH1Q08174 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
PCDH1Q08174 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH1Q08174 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.01□□□□□ -0.01
PCDH1Q08174 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15□□□□□ -0.01
PCDH1Q08174 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15□□□□□ -0.01
PCDH1Q08174 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15□□□□□ -0.01
PCDH1Q08174 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
PCDH1Q08174 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15□□□□□ -0.01
PCDH1Q08174 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15□□□□□ -0.01
PCDH1Q08174 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCDH1Q08174 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCDH1Q08174 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCDH1Q08174 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCDH1Q08174 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
PCDH1Q08174 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15□□□□□ -0.01
PCDH1Q08174 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
PCDH1Q08174 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCDH1Q08174 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCDH1Q08174 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms