Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CDK5Q00535 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDK5Q00535 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDK5Q00535 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDK5Q00535 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDK5Q00535 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.04□□□□□ -0.16
CDK5Q00535 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CDK5Q00535 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDK5Q00535 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDK5Q00535 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
CDK5Q00535 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.04□□□□□ -0.16
CDK5Q00535 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDK5Q00535 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
CDK5Q00535 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.04□□□□□ -0.16
CDK5Q00535 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.04□□□□□ -0.16
CDK5Q00535 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.04□□□□□ -0.16
CDK5Q00535 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDK5Q00535 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.04□□□□□ -0.16
CDK5Q00535 AC106730.1-201ENST00000566722 1090 ntBASIC14.04□□□□□ -0.16
CDK5Q00535 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.04□□□□□ -0.16
CDK5Q00535 AC105021.1-202ENST00000570572 669 ntBASIC14.04□□□□□ -0.16
CDK5Q00535 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.04□□□□□ -0.16
CDK5Q00535 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.04□□□□□ -0.16
CDK5Q00535 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
CDK5Q00535 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.04□□□□□ -0.16
CDK5Q00535 AC027601.4-201ENST00000611259 610 ntBASIC14.04□□□□□ -0.16
CDK5Q00535 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.04□□□□□ -0.16
CDK5Q00535 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CDK5Q00535 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CDK5Q00535 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDK5Q00535 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDK5Q00535 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDK5Q00535 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CDK5Q00535 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDK5Q00535 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDK5Q00535 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDK5Q00535 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.04□□□□□ -0.16
CDK5Q00535 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDK5Q00535 AC126755.1-201ENST00000525846 6405 ntBASIC14.04□□□□□ -0.16
CDK5Q00535 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.04□□□□□ -0.16
CDK5Q00535 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDK5Q00535 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDK5Q00535 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.03□□□□□ -0.16
CDK5Q00535 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDK5Q00535 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.03□□□□□ -0.16
CDK5Q00535 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDK5Q00535 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDK5Q00535 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDK5Q00535 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.03□□□□□ -0.16
CDK5Q00535 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDK5Q00535 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CDK5Q00535 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CDK5Q00535 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.03□□□□□ -0.16
CDK5Q00535 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDK5Q00535 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.03□□□□□ -0.16
CDK5Q00535 AC069335.1-201ENST00000489972 472 ntBASIC14.03□□□□□ -0.16
CDK5Q00535 KRT126P-201ENST00000549467 1181 ntBASIC14.03□□□□□ -0.16
CDK5Q00535 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDK5Q00535 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.03□□□□□ -0.16
CDK5Q00535 AL645728.2-202ENST00000641679 227 ntBASIC14.03□□□□□ -0.16
CDK5Q00535 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.03□□□□□ -0.16
CDK5Q00535 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CDK5Q00535 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDK5Q00535 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDK5Q00535 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDK5Q00535 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDK5Q00535 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.03□□□□□ -0.16
CDK5Q00535 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDK5Q00535 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CDK5Q00535 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CDK5Q00535 AC113367.3-201ENST00000508316 1912 ntBASIC14.03□□□□□ -0.16
CDK5Q00535 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDK5Q00535 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDK5Q00535 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CDK5Q00535 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.03□□□□□ -0.16
CDK5Q00535 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.03□□□□□ -0.16
CDK5Q00535 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDK5Q00535 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.03□□□□□ -0.16
CDK5Q00535 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDK5Q00535 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CDK5Q00535 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDK5Q00535 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDK5Q00535 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
CDK5Q00535 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDK5Q00535 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CDK5Q00535 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDK5Q00535 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CDK5Q00535 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDK5Q00535 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.02□□□□□ -0.16
CDK5Q00535 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.02□□□□□ -0.16
CDK5Q00535 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CDK5Q00535 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.02□□□□□ -0.16
CDK5Q00535 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CDK5Q00535 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDK5Q00535 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CDK5Q00535 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.02□□□□□ -0.16
CDK5Q00535 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CDK5Q00535 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.02□□□□□ -0.16
CDK5Q00535 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDK5Q00535 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms