Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-1P78426 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-1P78426 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-1P78426 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.8□□□□□ -0.2
NKX6-1P78426 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.8□□□□□ -0.2
NKX6-1P78426 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
NKX6-1P78426 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-1P78426 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.8□□□□□ -0.2
NKX6-1P78426 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-1P78426 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.8□□□□□ -0.2
NKX6-1P78426 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-1P78426 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-1P78426 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-1P78426 AL596087.1-201ENST00000400979 1969 ntBASIC13.8□□□□□ -0.2
NKX6-1P78426 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.8□□□□□ -0.2
NKX6-1P78426 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-1P78426 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
NKX6-1P78426 CYP2T1P-202ENST00000641596 2535 ntBASIC13.8□□□□□ -0.2
NKX6-1P78426 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.8□□□□□ -0.2
NKX6-1P78426 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.79□□□□□ -0.2
NKX6-1P78426 BNIP3P1-202ENST00000550043 1585 ntBASIC13.79□□□□□ -0.2
NKX6-1P78426 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-1P78426 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-1P78426 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-1P78426 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-1P78426 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.79□□□□□ -0.2
NKX6-1P78426 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.79□□□□□ -0.2
NKX6-1P78426 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
NKX6-1P78426 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.79□□□□□ -0.2
NKX6-1P78426 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
NKX6-1P78426 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-1P78426 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-1P78426 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-1P78426 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
NKX6-1P78426 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-1P78426 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-1P78426 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-1P78426 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-1P78426 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.79□□□□□ -0.2
NKX6-1P78426 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.79□□□□□ -0.2
NKX6-1P78426 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.79□□□□□ -0.2
NKX6-1P78426 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-1P78426 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.79□□□□□ -0.2
NKX6-1P78426 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
NKX6-1P78426 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-1P78426 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.79□□□□□ -0.2
NKX6-1P78426 AC092552.1-201ENST00000547243 906 ntBASIC13.79□□□□□ -0.2
NKX6-1P78426 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.79□□□□□ -0.2
NKX6-1P78426 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.79□□□□□ -0.2
NKX6-1P78426 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-1P78426 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-1P78426 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.79□□□□□ -0.2
NKX6-1P78426 MIR4525-201ENST00000580000 75 ntBASIC13.79□□□□□ -0.2
NKX6-1P78426 SRD5A3P1-201ENST00000603021 949 ntBASIC13.79□□□□□ -0.2
NKX6-1P78426 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.79□□□□□ -0.2
NKX6-1P78426 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.79□□□□□ -0.2
NKX6-1P78426 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.79□□□□□ -0.2
NKX6-1P78426 COX11-210ENST00000639671 696 ntBASIC13.79□□□□□ -0.2
NKX6-1P78426 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
NKX6-1P78426 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
NKX6-1P78426 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
NKX6-1P78426 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-1P78426 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-1P78426 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-1P78426 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.79□□□□□ -0.2
NKX6-1P78426 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-1P78426 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-1P78426 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-1P78426 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
NKX6-1P78426 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
NKX6-1P78426 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-1P78426 KRT8P37-201ENST00000451609 1420 ntBASIC13.79□□□□□ -0.2
NKX6-1P78426 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
NKX6-1P78426 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-1P78426 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-1P78426 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-1P78426 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-1P78426 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-1P78426 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.79□□□□□ -0.2
NKX6-1P78426 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.79□□□□□ -0.2
NKX6-1P78426 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-1P78426 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-1P78426 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-1P78426 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.78□□□□□ -0.2
NKX6-1P78426 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-1P78426 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.78□□□□□ -0.2
NKX6-1P78426 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-1P78426 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
NKX6-1P78426 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-1P78426 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
NKX6-1P78426 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-1P78426 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-1P78426 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.78□□□□□ -0.2
NKX6-1P78426 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
NKX6-1P78426 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.78□□□□□ -0.2
NKX6-1P78426 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-1P78426 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-1P78426 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-1P78426 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-1P78426 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms