Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.73□□□□□ -0.05
RAE1P78406 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RAE1P78406 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAE1P78406 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.73□□□□□ -0.05
RAE1P78406 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAE1P78406 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAE1P78406 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAE1P78406 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
RAE1P78406 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAE1P78406 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.72□□□□□ -0.05
RAE1P78406 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.72□□□□□ -0.05
RAE1P78406 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAE1P78406 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RAE1P78406 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.72□□□□□ -0.05
RAE1P78406 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.72□□□□□ -0.05
RAE1P78406 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAE1P78406 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAE1P78406 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAE1P78406 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAE1P78406 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAE1P78406 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.72□□□□□ -0.05
RAE1P78406 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAE1P78406 TIMM17BP1-201ENST00000545713 516 ntBASIC14.72□□□□□ -0.05
RAE1P78406 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAE1P78406 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.72□□□□□ -0.05
RAE1P78406 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.72□□□□□ -0.05
RAE1P78406 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAE1P78406 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAE1P78406 AL158212.4-201ENST00000624062 1286 ntBASIC14.72□□□□□ -0.05
RAE1P78406 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
RAE1P78406 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.72□□□□□ -0.05
RAE1P78406 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAE1P78406 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAE1P78406 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAE1P78406 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAE1P78406 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAE1P78406 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RAE1P78406 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.72□□□□□ -0.05
RAE1P78406 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAE1P78406 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAE1P78406 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAE1P78406 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAE1P78406 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAE1P78406 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAE1P78406 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAE1P78406 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAE1P78406 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAE1P78406 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAE1P78406 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.72□□□□□ -0.05
RAE1P78406 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAE1P78406 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAE1P78406 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAE1P78406 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
RAE1P78406 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAE1P78406 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAE1P78406 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAE1P78406 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAE1P78406 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAE1P78406 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAE1P78406 BTBD7P1-201ENST00000447253 1453 ntBASIC14.71□□□□□ -0.05
RAE1P78406 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAE1P78406 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAE1P78406 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAE1P78406 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.71□□□□□ -0.05
RAE1P78406 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.71□□□□□ -0.05
RAE1P78406 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
RAE1P78406 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAE1P78406 FAM8A3P-201ENST00000427218 844 ntBASIC14.71□□□□□ -0.05
RAE1P78406 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.71□□□□□ -0.05
RAE1P78406 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAE1P78406 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.71□□□□□ -0.05
RAE1P78406 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.71□□□□□ -0.05
RAE1P78406 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAE1P78406 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.05
RAE1P78406 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.71□□□□□ -0.05
RAE1P78406 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.71□□□□□ -0.05
RAE1P78406 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.71□□□□□ -0.05
RAE1P78406 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.71□□□□□ -0.05
RAE1P78406 AC004790.1-201ENST00000612686 536 ntBASIC14.71□□□□□ -0.05
RAE1P78406 AC093512.1-201ENST00000617969 520 ntBASIC14.71□□□□□ -0.05
RAE1P78406 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.71□□□□□ -0.05
RAE1P78406 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
RAE1P78406 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.71□□□□□ -0.05
RAE1P78406 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAE1P78406 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAE1P78406 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
RAE1P78406 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAE1P78406 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAE1P78406 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAE1P78406 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
RAE1P78406 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
RAE1P78406 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
RAE1P78406 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAE1P78406 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAE1P78406 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RAE1P78406 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
RAE1P78406 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RAE1P78406 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RAE1P78406 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.71□□□□□ -0.06
RAE1P78406 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms