Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEP78395 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.76■□□□□ 0.11
PRAMEP78395 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEP78395 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEP78395 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.76■□□□□ 0.11
PRAMEP78395 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PRAMEP78395 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEP78395 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.75■□□□□ 0.11
PRAMEP78395 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
PRAMEP78395 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
PRAMEP78395 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.75■□□□□ 0.11
PRAMEP78395 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEP78395 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEP78395 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEP78395 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEP78395 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEP78395 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEP78395 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEP78395 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEP78395 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEP78395 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PRAMEP78395 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEP78395 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEP78395 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.75■□□□□ 0.11
PRAMEP78395 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.75■□□□□ 0.11
PRAMEP78395 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.75■□□□□ 0.11
PRAMEP78395 AC140878.1-201ENST00000565277 250 ntBASIC15.75■□□□□ 0.11
PRAMEP78395 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.75■□□□□ 0.11
PRAMEP78395 AC015911.4-201ENST00000588022 1070 ntBASIC15.75■□□□□ 0.11
PRAMEP78395 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.75■□□□□ 0.11
PRAMEP78395 AL138828.2-201ENST00000615812 383 ntBASIC15.75■□□□□ 0.11
PRAMEP78395 AC139530.3-201ENST00000620344 690 ntBASIC15.75■□□□□ 0.11
PRAMEP78395 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.75■□□□□ 0.11
PRAMEP78395 AC093028.1-201ENST00000622998 982 ntBASIC15.75■□□□□ 0.11
PRAMEP78395 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PRAMEP78395 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEP78395 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PRAMEP78395 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEP78395 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.75■□□□□ 0.11
PRAMEP78395 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEP78395 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.75■□□□□ 0.11
PRAMEP78395 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.75■□□□□ 0.11
PRAMEP78395 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEP78395 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.75■□□□□ 0.11
PRAMEP78395 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.75■□□□□ 0.11
PRAMEP78395 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEP78395 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEP78395 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.75■□□□□ 0.11
PRAMEP78395 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.74■□□□□ 0.11
PRAMEP78395 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEP78395 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.74■□□□□ 0.11
PRAMEP78395 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.74■□□□□ 0.11
PRAMEP78395 OR2I1P-210ENST00000642037 4691 ntBASIC15.74■□□□□ 0.11
PRAMEP78395 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEP78395 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.74■□□□□ 0.11
PRAMEP78395 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEP78395 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.74■□□□□ 0.11
PRAMEP78395 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEP78395 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEP78395 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEP78395 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.74■□□□□ 0.11
PRAMEP78395 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEP78395 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEP78395 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.74■□□□□ 0.11
PRAMEP78395 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.74■□□□□ 0.11
PRAMEP78395 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.74■□□□□ 0.11
PRAMEP78395 RN7SL618P-201ENST00000477850 296 ntBASIC15.74■□□□□ 0.11
PRAMEP78395 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.74■□□□□ 0.11
PRAMEP78395 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.74■□□□□ 0.11
PRAMEP78395 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEP78395 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.74■□□□□ 0.11
PRAMEP78395 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.74■□□□□ 0.11
PRAMEP78395 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEP78395 TEX28P1-201ENST00000613479 1221 ntBASIC15.74■□□□□ 0.11
PRAMEP78395 TEX28P2-201ENST00000617764 1221 ntBASIC15.74■□□□□ 0.11
PRAMEP78395 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEP78395 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.74■□□□□ 0.11
PRAMEP78395 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.74■□□□□ 0.11
PRAMEP78395 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
PRAMEP78395 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEP78395 AC112693.3-201ENST00000624819 1983 ntBASIC15.74■□□□□ 0.11
PRAMEP78395 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEP78395 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEP78395 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEP78395 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PRAMEP78395 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEP78395 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
PRAMEP78395 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEP78395 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PRAMEP78395 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.74■□□□□ 0.11
PRAMEP78395 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.74■□□□□ 0.11
PRAMEP78395 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEP78395 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEP78395 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.73■□□□□ 0.11
PRAMEP78395 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEP78395 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.73■□□□□ 0.11
PRAMEP78395 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEP78395 AC006486.2-201ENST00000624246 2199 ntBASIC15.73■□□□□ 0.11
PRAMEP78395 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEP78395 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms