Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.79□□□□□ -0.04
SKP1P63208 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SKP1P63208 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SKP1P63208 AL589987.1-201ENST00000453380 819 ntBASIC14.79□□□□□ -0.04
SKP1P63208 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.79□□□□□ -0.04
SKP1P63208 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SKP1P63208 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SKP1P63208 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.79□□□□□ -0.04
SKP1P63208 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.79□□□□□ -0.04
SKP1P63208 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SKP1P63208 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.79□□□□□ -0.04
SKP1P63208 AC123567.1-201ENST00000548294 1261 ntBASIC14.79□□□□□ -0.04
SKP1P63208 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.79□□□□□ -0.04
SKP1P63208 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.79□□□□□ -0.04
SKP1P63208 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.79□□□□□ -0.04
SKP1P63208 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SKP1P63208 AL596257.1-201ENST00000641463 2694 ntBASIC14.79□□□□□ -0.04
SKP1P63208 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SKP1P63208 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SKP1P63208 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.79□□□□□ -0.04
SKP1P63208 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SKP1P63208 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.79□□□□□ -0.04
SKP1P63208 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SKP1P63208 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SKP1P63208 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SKP1P63208 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SKP1P63208 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SKP1P63208 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SKP1P63208 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SKP1P63208 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SKP1P63208 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SKP1P63208 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SKP1P63208 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.78□□□□□ -0.04
SKP1P63208 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SKP1P63208 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.78□□□□□ -0.04
SKP1P63208 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SKP1P63208 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SKP1P63208 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SKP1P63208 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SKP1P63208 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.78□□□□□ -0.04
SKP1P63208 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SKP1P63208 MIR661-201ENST00000384842 89 ntBASIC14.78□□□□□ -0.04
SKP1P63208 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.78□□□□□ -0.04
SKP1P63208 AL442647.2-201ENST00000429864 857 ntBASIC14.78□□□□□ -0.04
SKP1P63208 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SKP1P63208 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.78□□□□□ -0.04
SKP1P63208 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.78□□□□□ -0.04
SKP1P63208 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.78□□□□□ -0.04
SKP1P63208 AL391069.4-201ENST00000609583 481 ntBASIC14.78□□□□□ -0.04
SKP1P63208 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SKP1P63208 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SKP1P63208 AC007431.3-201ENST00000623221 587 ntBASIC14.78□□□□□ -0.04
SKP1P63208 AC068418.2-201ENST00000577309 3703 ntBASIC14.78□□□□□ -0.04
SKP1P63208 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SKP1P63208 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
SKP1P63208 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
SKP1P63208 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SKP1P63208 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SKP1P63208 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SKP1P63208 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SKP1P63208 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SKP1P63208 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SKP1P63208 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SKP1P63208 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SKP1P63208 CICP13-201ENST00000422015 2789 ntBASIC14.78□□□□□ -0.04
SKP1P63208 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.78□□□□□ -0.04
SKP1P63208 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.78□□□□□ -0.04
SKP1P63208 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SKP1P63208 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SKP1P63208 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SKP1P63208 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.77□□□□□ -0.04
SKP1P63208 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.77□□□□□ -0.04
SKP1P63208 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SKP1P63208 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
SKP1P63208 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SKP1P63208 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SKP1P63208 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.77□□□□□ -0.04
SKP1P63208 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SKP1P63208 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
SKP1P63208 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.77□□□□□ -0.04
SKP1P63208 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.77□□□□□ -0.04
SKP1P63208 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
SKP1P63208 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SKP1P63208 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SKP1P63208 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SKP1P63208 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SKP1P63208 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
SKP1P63208 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SKP1P63208 AC098614.1-201ENST00000368528 745 ntBASIC14.77□□□□□ -0.05
SKP1P63208 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.77□□□□□ -0.05
SKP1P63208 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
SKP1P63208 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.77□□□□□ -0.05
SKP1P63208 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SKP1P63208 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.77□□□□□ -0.05
SKP1P63208 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.77□□□□□ -0.05
SKP1P63208 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.77□□□□□ -0.05
SKP1P63208 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.77□□□□□ -0.05
SKP1P63208 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.77□□□□□ -0.05
SKP1P63208 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SKP1P63208 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms