Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN8P56748 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN8P56748 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN8P56748 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN8P56748 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.81□□□□□ -0.04
CLDN8P56748 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN8P56748 CETN4P-206ENST00000642099 2168 ntBASIC14.81□□□□□ -0.04
CLDN8P56748 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN8P56748 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN8P56748 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN8P56748 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN8P56748 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CLDN8P56748 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CLDN8P56748 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CLDN8P56748 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CLDN8P56748 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.8□□□□□ -0.04
CLDN8P56748 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.8□□□□□ -0.04
CLDN8P56748 AP000845.1-201ENST00000581677 2131 ntBASIC14.8□□□□□ -0.04
CLDN8P56748 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN8P56748 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN8P56748 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN8P56748 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN8P56748 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN8P56748 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN8P56748 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CLDN8P56748 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN8P56748 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.8□□□□□ -0.04
CLDN8P56748 AL080243.2-201ENST00000418783 582 ntBASIC14.8□□□□□ -0.04
CLDN8P56748 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.8□□□□□ -0.04
CLDN8P56748 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN8P56748 SERBP1P3-201ENST00000459980 809 ntBASIC14.8□□□□□ -0.04
CLDN8P56748 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.8□□□□□ -0.04
CLDN8P56748 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.8□□□□□ -0.04
CLDN8P56748 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.8□□□□□ -0.04
CLDN8P56748 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CLDN8P56748 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.8□□□□□ -0.04
CLDN8P56748 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN8P56748 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN8P56748 AC025048.3-201ENST00000590609 569 ntBASIC14.8□□□□□ -0.04
CLDN8P56748 AC005702.4-201ENST00000618393 416 ntBASIC14.8□□□□□ -0.04
CLDN8P56748 AL033527.5-202ENST00000641632 1098 ntBASIC14.8□□□□□ -0.04
CLDN8P56748 AL645728.2-202ENST00000641679 227 ntBASIC14.8□□□□□ -0.04
CLDN8P56748 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN8P56748 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CLDN8P56748 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN8P56748 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN8P56748 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN8P56748 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN8P56748 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN8P56748 FLJ16779-201ENST00000612722 7638 ntBASIC14.8□□□□□ -0.04
CLDN8P56748 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN8P56748 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN8P56748 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN8P56748 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN8P56748 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN8P56748 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN8P56748 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN8P56748 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN8P56748 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN8P56748 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN8P56748 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CLDN8P56748 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN8P56748 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN8P56748 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN8P56748 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN8P56748 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN8P56748 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CLDN8P56748 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN8P56748 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN8P56748 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN8P56748 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN8P56748 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CLDN8P56748 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN8P56748 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN8P56748 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN8P56748 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN8P56748 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN8P56748 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.79□□□□□ -0.04
CLDN8P56748 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.79□□□□□ -0.04
CLDN8P56748 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
CLDN8P56748 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN8P56748 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN8P56748 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN8P56748 RPSAP43-201ENST00000402237 625 ntBASIC14.79□□□□□ -0.04
CLDN8P56748 KRT18P64-201ENST00000434946 1219 ntBASIC14.79□□□□□ -0.04
CLDN8P56748 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CLDN8P56748 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CLDN8P56748 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.79□□□□□ -0.04
CLDN8P56748 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.79□□□□□ -0.04
CLDN8P56748 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.79□□□□□ -0.04
CLDN8P56748 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.79□□□□□ -0.04
CLDN8P56748 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN8P56748 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN8P56748 AL512356.2-201ENST00000546955 174 ntBASIC14.79□□□□□ -0.04
CLDN8P56748 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CLDN8P56748 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.79□□□□□ -0.04
CLDN8P56748 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.79□□□□□ -0.04
CLDN8P56748 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.79□□□□□ -0.04
CLDN8P56748 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.79□□□□□ -0.04
CLDN8P56748 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms