Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN6P56747 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN6P56747 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.88□□□□□ -0.03
CLDN6P56747 AL354989.2-201ENST00000435838 1540 ntBASIC14.88□□□□□ -0.03
CLDN6P56747 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN6P56747 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CLDN6P56747 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN6P56747 AL138799.1-201ENST00000448213 1675 ntBASIC14.88□□□□□ -0.03
CLDN6P56747 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN6P56747 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CLDN6P56747 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN6P56747 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN6P56747 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN6P56747 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.88□□□□□ -0.03
CLDN6P56747 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CLDN6P56747 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.88□□□□□ -0.03
CLDN6P56747 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
CLDN6P56747 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.88□□□□□ -0.03
CLDN6P56747 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.88□□□□□ -0.03
CLDN6P56747 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC14.88□□□□□ -0.03
CLDN6P56747 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.88□□□□□ -0.03
CLDN6P56747 AC091804.1-201ENST00000486888 567 ntBASIC14.88□□□□□ -0.03
CLDN6P56747 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN6P56747 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN6P56747 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN6P56747 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC14.88□□□□□ -0.03
CLDN6P56747 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CLDN6P56747 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CLDN6P56747 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.88□□□□□ -0.03
CLDN6P56747 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.88□□□□□ -0.03
CLDN6P56747 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.88□□□□□ -0.03
CLDN6P56747 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC14.88□□□□□ -0.03
CLDN6P56747 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.88□□□□□ -0.03
CLDN6P56747 AC006453.4-201ENST00000636949 1252 ntBASIC14.88□□□□□ -0.03
CLDN6P56747 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.88□□□□□ -0.03
CLDN6P56747 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
CLDN6P56747 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN6P56747 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN6P56747 PCDH8P1-201ENST00000428983 2773 ntBASIC14.88□□□□□ -0.03
CLDN6P56747 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN6P56747 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.88□□□□□ -0.03
CLDN6P56747 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN6P56747 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
CLDN6P56747 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.88□□□□□ -0.03
CLDN6P56747 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN6P56747 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN6P56747 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN6P56747 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN6P56747 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CLDN6P56747 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CLDN6P56747 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN6P56747 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN6P56747 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN6P56747 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.87□□□□□ -0.03
CLDN6P56747 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN6P56747 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.87□□□□□ -0.03
CLDN6P56747 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.87□□□□□ -0.03
CLDN6P56747 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN6P56747 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN6P56747 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CLDN6P56747 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN6P56747 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.87□□□□□ -0.03
CLDN6P56747 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN6P56747 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
CLDN6P56747 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN6P56747 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN6P56747 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN6P56747 AL662890.1-201ENST00000396818 632 ntBASIC14.87□□□□□ -0.03
CLDN6P56747 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN6P56747 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN6P56747 IMP3P2-201ENST00000489760 475 ntBASIC14.87□□□□□ -0.03
CLDN6P56747 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.87□□□□□ -0.03
CLDN6P56747 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN6P56747 MIR4706-201ENST00000582134 82 ntBASIC14.87□□□□□ -0.03
CLDN6P56747 MIR5572-201ENST00000583188 137 ntBASIC14.87□□□□□ -0.03
CLDN6P56747 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN6P56747 AC015967.2-201ENST00000624092 234 ntBASIC14.87□□□□□ -0.03
CLDN6P56747 AC006435.4-201ENST00000625037 234 ntBASIC14.87□□□□□ -0.03
CLDN6P56747 AL356737.1-201ENST00000634391 234 ntBASIC14.87□□□□□ -0.03
CLDN6P56747 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CLDN6P56747 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN6P56747 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN6P56747 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN6P56747 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN6P56747 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.87□□□□□ -0.03
CLDN6P56747 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.87□□□□□ -0.03
CLDN6P56747 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.87□□□□□ -0.03
CLDN6P56747 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.87□□□□□ -0.03
CLDN6P56747 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CLDN6P56747 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN6P56747 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CLDN6P56747 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN6P56747 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CLDN6P56747 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN6P56747 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN6P56747 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN6P56747 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN6P56747 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN6P56747 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CLDN6P56747 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms