Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH13P55290 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH13P55290 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CDH13P55290 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
CDH13P55290 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH13P55290 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH13P55290 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CDH13P55290 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH13P55290 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH13P55290 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH13P55290 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH13P55290 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH13P55290 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH13P55290 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH13P55290 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.25■□□□□ 0.03
CDH13P55290 FGD5P1-202ENST00000614866 2498 ntBASIC15.25■□□□□ 0.03
CDH13P55290 FAM45BP-202ENST00000592932 1624 ntBASIC15.25■□□□□ 0.03
CDH13P55290 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH13P55290 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.25■□□□□ 0.03
CDH13P55290 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH13P55290 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH13P55290 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.25■□□□□ 0.03
CDH13P55290 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.25■□□□□ 0.03
CDH13P55290 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH13P55290 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDH13P55290 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH13P55290 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.25■□□□□ 0.03
CDH13P55290 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.25■□□□□ 0.03
CDH13P55290 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.25■□□□□ 0.03
CDH13P55290 AC004835.2-201ENST00000603762 682 ntBASIC15.25■□□□□ 0.03
CDH13P55290 AC007967.4-201ENST00000614700 386 ntBASIC15.25■□□□□ 0.03
CDH13P55290 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH13P55290 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CDH13P55290 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH13P55290 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH13P55290 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH13P55290 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH13P55290 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDH13P55290 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH13P55290 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CDH13P55290 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH13P55290 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH13P55290 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH13P55290 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CDH13P55290 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
CDH13P55290 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.24■□□□□ 0.03
CDH13P55290 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
CDH13P55290 KRT8P12-202ENST00000472924 1397 ntBASIC15.24■□□□□ 0.03
CDH13P55290 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CDH13P55290 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH13P55290 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH13P55290 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH13P55290 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH13P55290 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH13P55290 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
CDH13P55290 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH13P55290 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.24■□□□□ 0.03
CDH13P55290 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH13P55290 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH13P55290 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH13P55290 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH13P55290 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH13P55290 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH13P55290 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH13P55290 LINC00552-201ENST00000625151 2579 ntBASIC15.24■□□□□ 0.03
CDH13P55290 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH13P55290 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH13P55290 ZBED1P1-201ENST00000502364 1930 ntBASIC15.24■□□□□ 0.03
CDH13P55290 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH13P55290 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH13P55290 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH13P55290 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CDH13P55290 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH13P55290 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH13P55290 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH13P55290 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.24■□□□□ 0.03
CDH13P55290 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.24■□□□□ 0.03
CDH13P55290 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH13P55290 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.24■□□□□ 0.03
CDH13P55290 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.24■□□□□ 0.03
CDH13P55290 AP000344.2-201ENST00000512987 629 ntBASIC15.24■□□□□ 0.03
CDH13P55290 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CDH13P55290 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.24■□□□□ 0.03
CDH13P55290 MIR3687-2-201ENST00000577708 61 ntBASIC15.24■□□□□ 0.03
CDH13P55290 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH13P55290 MIR3687-1-201ENST00000614492 61 ntBASIC15.24■□□□□ 0.03
CDH13P55290 MIR6080-201ENST00000617359 66 ntBASIC15.24■□□□□ 0.03
CDH13P55290 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH13P55290 OR2I1P-210ENST00000642037 4691 ntBASIC15.24■□□□□ 0.03
CDH13P55290 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH13P55290 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CDH13P55290 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH13P55290 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH13P55290 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CDH13P55290 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH13P55290 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH13P55290 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH13P55290 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH13P55290 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH13P55290 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms