Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDE1AP54750 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
PDE1AP54750 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.93■□□□□ 0.62
PDE1AP54750 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
PDE1AP54750 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.93■□□□□ 0.62
PDE1AP54750 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDE1AP54750 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.93■□□□□ 0.62
PDE1AP54750 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.93■□□□□ 0.62
PDE1AP54750 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.93■□□□□ 0.62
PDE1AP54750 INGX-202ENST00000489074 768 ntBASIC18.93■□□□□ 0.62
PDE1AP54750 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.93■□□□□ 0.62
PDE1AP54750 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.93■□□□□ 0.62
PDE1AP54750 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.93■□□□□ 0.62
PDE1AP54750 AL662799.1-202ENST00000614205 422 ntBASIC18.93■□□□□ 0.62
PDE1AP54750 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDE1AP54750 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDE1AP54750 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDE1AP54750 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDE1AP54750 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PDE1AP54750 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.93■□□□□ 0.62
PDE1AP54750 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDE1AP54750 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PDE1AP54750 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDE1AP54750 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDE1AP54750 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDE1AP54750 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDE1AP54750 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDE1AP54750 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDE1AP54750 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
PDE1AP54750 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDE1AP54750 ACE3P-201ENST00000423435 1973 ntBASIC18.92■□□□□ 0.62
PDE1AP54750 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDE1AP54750 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDE1AP54750 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDE1AP54750 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDE1AP54750 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDE1AP54750 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18.92■□□□□ 0.62
PDE1AP54750 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PDE1AP54750 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDE1AP54750 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.92■□□□□ 0.62
PDE1AP54750 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.92■□□□□ 0.62
PDE1AP54750 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDE1AP54750 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.92■□□□□ 0.62
PDE1AP54750 SPTLC1P1-201ENST00000447199 261 ntBASIC18.92■□□□□ 0.62
PDE1AP54750 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDE1AP54750 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
PDE1AP54750 RN7SL399P-201ENST00000471648 279 ntBASIC18.92■□□□□ 0.62
PDE1AP54750 FAM86LP-201ENST00000478302 853 ntBASIC18.92■□□□□ 0.62
PDE1AP54750 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.92■□□□□ 0.62
PDE1AP54750 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.92■□□□□ 0.62
PDE1AP54750 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDE1AP54750 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
PDE1AP54750 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDE1AP54750 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDE1AP54750 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDE1AP54750 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDE1AP54750 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDE1AP54750 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC18.92■□□□□ 0.62
PDE1AP54750 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
PDE1AP54750 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDE1AP54750 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.92■□□□□ 0.62
PDE1AP54750 AJ011931.1-201ENST00000618749 2492 ntBASIC18.92■□□□□ 0.62
PDE1AP54750 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDE1AP54750 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDE1AP54750 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDE1AP54750 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PDE1AP54750 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDE1AP54750 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDE1AP54750 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDE1AP54750 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDE1AP54750 GPI-205ENST00000586425 1799 ntTSL 5 BASIC18.91■□□□□ 0.62
PDE1AP54750 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.91■□□□□ 0.62
PDE1AP54750 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDE1AP54750 LINC02228-204ENST00000642115 2962 ntBASIC18.91■□□□□ 0.62
PDE1AP54750 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDE1AP54750 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC18.91■□□□□ 0.62
PDE1AP54750 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDE1AP54750 MIR661-201ENST00000384842 89 ntBASIC18.91■□□□□ 0.62
PDE1AP54750 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.91■□□□□ 0.62
PDE1AP54750 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.91■□□□□ 0.62
PDE1AP54750 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.91■□□□□ 0.62
PDE1AP54750 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.91■□□□□ 0.62
PDE1AP54750 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.91■□□□□ 0.62
PDE1AP54750 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.91■□□□□ 0.62
PDE1AP54750 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.91■□□□□ 0.62
PDE1AP54750 AC011467.4-201ENST00000594891 528 ntBASIC18.91■□□□□ 0.62
PDE1AP54750 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC18.91■□□□□ 0.62
PDE1AP54750 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.91■□□□□ 0.62
PDE1AP54750 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PDE1AP54750 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDE1AP54750 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDE1AP54750 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDE1AP54750 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDE1AP54750 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC18.91■□□□□ 0.62
PDE1AP54750 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDE1AP54750 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDE1AP54750 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDE1AP54750 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PDE1AP54750 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDE1AP54750 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms