Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK2P53671 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
LIMK2P53671 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.7■□□□□ 0.1
LIMK2P53671 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK2P53671 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK2P53671 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
LIMK2P53671 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LIMK2P53671 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK2P53671 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
LIMK2P53671 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.7■□□□□ 0.1
LIMK2P53671 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK2P53671 SPTLC1P1-201ENST00000447199 261 ntBASIC15.7■□□□□ 0.1
LIMK2P53671 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.7■□□□□ 0.1
LIMK2P53671 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.7■□□□□ 0.1
LIMK2P53671 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.7■□□□□ 0.1
LIMK2P53671 AL079307.3-201ENST00000556114 283 ntBASIC15.7■□□□□ 0.1
LIMK2P53671 AC009407.1-201ENST00000568958 598 ntBASIC15.7■□□□□ 0.1
LIMK2P53671 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.7■□□□□ 0.1
LIMK2P53671 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK2P53671 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.7■□□□□ 0.1
LIMK2P53671 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK2P53671 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
LIMK2P53671 AL844908.2-201ENST00000609461 460 ntBASIC15.7■□□□□ 0.1
LIMK2P53671 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.7■□□□□ 0.1
LIMK2P53671 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK2P53671 AL662799.1-202ENST00000614205 422 ntBASIC15.7■□□□□ 0.1
LIMK2P53671 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
LIMK2P53671 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
LIMK2P53671 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.7■□□□□ 0.1
LIMK2P53671 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK2P53671 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK2P53671 AC067930.6-201ENST00000623257 4947 ntBASIC15.7■□□□□ 0.1
LIMK2P53671 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK2P53671 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.7■□□□□ 0.1
LIMK2P53671 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.7■□□□□ 0.1
LIMK2P53671 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK2P53671 CICP23-201ENST00000605013 2741 ntBASIC15.7■□□□□ 0.1
LIMK2P53671 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK2P53671 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK2P53671 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.7■□□□□ 0.1
LIMK2P53671 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK2P53671 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK2P53671 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK2P53671 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LIMK2P53671 AC063926.3-201ENST00000624734 5658 ntBASIC15.7■□□□□ 0.1
LIMK2P53671 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK2P53671 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK2P53671 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK2P53671 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK2P53671 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LIMK2P53671 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LIMK2P53671 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
LIMK2P53671 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK2P53671 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.69■□□□□ 0.1
LIMK2P53671 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK2P53671 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK2P53671 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK2P53671 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK2P53671 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK2P53671 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.69■□□□□ 0.1
LIMK2P53671 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.69■□□□□ 0.1
LIMK2P53671 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LIMK2P53671 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK2P53671 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.69■□□□□ 0.1
LIMK2P53671 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.69■□□□□ 0.1
LIMK2P53671 GAPDHP21-201ENST00000450301 1010 ntBASIC15.69■□□□□ 0.1
LIMK2P53671 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK2P53671 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK2P53671 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK2P53671 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK2P53671 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK2P53671 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK2P53671 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.69■□□□□ 0.1
LIMK2P53671 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LIMK2P53671 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK2P53671 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.69■□□□□ 0.1
LIMK2P53671 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.69■□□□□ 0.1
LIMK2P53671 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK2P53671 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.69■□□□□ 0.1
LIMK2P53671 LINC00528-201ENST00000600723 2160 ntBASIC15.69■□□□□ 0.1
LIMK2P53671 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK2P53671 AC013726.1-201ENST00000563747 2285 ntBASIC15.69■□□□□ 0.1
LIMK2P53671 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK2P53671 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK2P53671 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.69■□□□□ 0.1
LIMK2P53671 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.68■□□□□ 0.1
LIMK2P53671 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
LIMK2P53671 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.68■□□□□ 0.1
LIMK2P53671 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LIMK2P53671 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.68■□□□□ 0.1
LIMK2P53671 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIMK2P53671 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
LIMK2P53671 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIMK2P53671 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
LIMK2P53671 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIMK2P53671 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIMK2P53671 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
LIMK2P53671 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
LIMK2P53671 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.68■□□□□ 0.1
LIMK2P53671 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms