Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.15■□□□□ 0.02
CLCN2P51788 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
CLCN2P51788 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
CLCN2P51788 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCN2P51788 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCN2P51788 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLCN2P51788 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCN2P51788 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLCN2P51788 CR383656.2-201ENST00000548656 2254 ntBASIC15.15■□□□□ 0.02
CLCN2P51788 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCN2P51788 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLCN2P51788 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CLCN2P51788 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CLCN2P51788 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCN2P51788 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.15■□□□□ 0.02
CLCN2P51788 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCN2P51788 AC105250.1-201ENST00000509378 2057 ntBASIC15.15■□□□□ 0.02
CLCN2P51788 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCN2P51788 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCN2P51788 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCN2P51788 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CLCN2P51788 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCN2P51788 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN2P51788 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CLCN2P51788 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN2P51788 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN2P51788 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN2P51788 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN2P51788 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CLCN2P51788 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CLCN2P51788 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN2P51788 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.14■□□□□ 0.01
CLCN2P51788 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN2P51788 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN2P51788 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.14■□□□□ 0.01
CLCN2P51788 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN2P51788 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN2P51788 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CLCN2P51788 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CLCN2P51788 AC090616.6-203ENST00000579186 1945 ntBASIC15.14■□□□□ 0.01
CLCN2P51788 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CLCN2P51788 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN2P51788 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN2P51788 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.14■□□□□ 0.01
CLCN2P51788 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN2P51788 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CLCN2P51788 MIR770-201ENST00000390219 98 ntBASIC15.14■□□□□ 0.01
CLCN2P51788 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN2P51788 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.14■□□□□ 0.01
CLCN2P51788 MIR943-201ENST00000401286 94 ntBASIC15.14■□□□□ 0.01
CLCN2P51788 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN2P51788 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.14■□□□□ 0.01
CLCN2P51788 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.14■□□□□ 0.01
CLCN2P51788 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.14■□□□□ 0.01
CLCN2P51788 AC069120.2-201ENST00000524091 540 ntBASIC15.14■□□□□ 0.01
CLCN2P51788 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.14■□□□□ 0.01
CLCN2P51788 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.14■□□□□ 0.01
CLCN2P51788 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.14■□□□□ 0.01
CLCN2P51788 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN2P51788 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.14■□□□□ 0.01
CLCN2P51788 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.14■□□□□ 0.01
CLCN2P51788 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.14■□□□□ 0.01
CLCN2P51788 AC007967.4-201ENST00000614700 386 ntBASIC15.14■□□□□ 0.01
CLCN2P51788 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN2P51788 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN2P51788 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN2P51788 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.14■□□□□ 0.01
CLCN2P51788 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN2P51788 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.14■□□□□ 0.01
CLCN2P51788 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CLCN2P51788 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN2P51788 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN2P51788 AC006504.5-208ENST00000588784 2401 ntBASIC15.14■□□□□ 0.01
CLCN2P51788 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN2P51788 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CLCN2P51788 AJ011931.1-201ENST00000618749 2492 ntBASIC15.14■□□□□ 0.01
CLCN2P51788 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN2P51788 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN2P51788 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN2P51788 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN2P51788 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN2P51788 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN2P51788 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN2P51788 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN2P51788 AL035456.1-201ENST00000456064 1369 ntBASIC15.13■□□□□ 0.01
CLCN2P51788 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC15.13■□□□□ 0.01
CLCN2P51788 AC126365.1-201ENST00000578585 1514 ntBASIC15.13■□□□□ 0.01
CLCN2P51788 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.13■□□□□ 0.01
CLCN2P51788 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN2P51788 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN2P51788 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN2P51788 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN2P51788 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN2P51788 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.13■□□□□ 0.01
CLCN2P51788 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN2P51788 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN2P51788 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CLCN2P51788 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.13■□□□□ 0.01
CLCN2P51788 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.13■□□□□ 0.01
CLCN2P51788 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms