Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.44□□□□□ -0.26
HCFC1P51610 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HCFC1P51610 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HCFC1P51610 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
HCFC1P51610 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
HCFC1P51610 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
HCFC1P51610 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
HCFC1P51610 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HCFC1P51610 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.44□□□□□ -0.26
HCFC1P51610 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HCFC1P51610 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HCFC1P51610 POM121L10P-201ENST00000436994 1285 ntBASIC13.44□□□□□ -0.26
HCFC1P51610 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.44□□□□□ -0.26
HCFC1P51610 AC023310.1-201ENST00000554836 735 ntBASIC13.44□□□□□ -0.26
HCFC1P51610 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
HCFC1P51610 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
HCFC1P51610 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HCFC1P51610 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HCFC1P51610 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.44□□□□□ -0.26
HCFC1P51610 BX539320.1-201ENST00000623759 877 ntBASIC13.44□□□□□ -0.26
HCFC1P51610 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.44□□□□□ -0.26
HCFC1P51610 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.44□□□□□ -0.26
HCFC1P51610 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
HCFC1P51610 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.44□□□□□ -0.26
HCFC1P51610 BCL2-203ENST00000589955 5011 ntBASIC13.44□□□□□ -0.26
HCFC1P51610 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HCFC1P51610 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.44□□□□□ -0.26
HCFC1P51610 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HCFC1P51610 AL023775.1-201ENST00000454907 1746 ntBASIC13.44□□□□□ -0.26
HCFC1P51610 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.44□□□□□ -0.26
HCFC1P51610 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HCFC1P51610 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HCFC1P51610 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HCFC1P51610 LRRC59-203ENST00000576448 1531 ntBASIC13.44□□□□□ -0.26
HCFC1P51610 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.44□□□□□ -0.26
HCFC1P51610 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
HCFC1P51610 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.44□□□□□ -0.26
HCFC1P51610 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HCFC1P51610 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC13.44□□□□□ -0.26
HCFC1P51610 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HCFC1P51610 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HCFC1P51610 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HCFC1P51610 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HCFC1P51610 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HCFC1P51610 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HCFC1P51610 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.44□□□□□ -0.26
HCFC1P51610 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
HCFC1P51610 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.44□□□□□ -0.26
HCFC1P51610 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.44□□□□□ -0.26
HCFC1P51610 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HCFC1P51610 AC013355.1-201ENST00000562625 723 ntBASIC13.44□□□□□ -0.26
HCFC1P51610 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.44□□□□□ -0.26
HCFC1P51610 MIR4313-201ENST00000580760 101 ntBASIC13.44□□□□□ -0.26
HCFC1P51610 AC138649.2-201ENST00000615886 705 ntBASIC13.44□□□□□ -0.26
HCFC1P51610 AC138627.1-207ENST00000641560 1006 ntBASIC13.44□□□□□ -0.26
HCFC1P51610 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.44□□□□□ -0.26
HCFC1P51610 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HCFC1P51610 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HCFC1P51610 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HCFC1P51610 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.43□□□□□ -0.26
HCFC1P51610 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HCFC1P51610 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.43□□□□□ -0.26
HCFC1P51610 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HCFC1P51610 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.43□□□□□ -0.26
HCFC1P51610 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HCFC1P51610 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HCFC1P51610 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HCFC1P51610 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HCFC1P51610 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HCFC1P51610 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HCFC1P51610 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
HCFC1P51610 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
HCFC1P51610 AL662890.1-201ENST00000396818 632 ntBASIC13.43□□□□□ -0.26
HCFC1P51610 EIF3FP3-201ENST00000434851 1086 ntBASIC13.43□□□□□ -0.26
HCFC1P51610 RPS2P36-201ENST00000456516 831 ntBASIC13.43□□□□□ -0.26
HCFC1P51610 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
HCFC1P51610 AC079328.1-201ENST00000560358 952 ntBASIC13.43□□□□□ -0.26
HCFC1P51610 RN7SL574P-201ENST00000581512 297 ntBASIC13.43□□□□□ -0.26
HCFC1P51610 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HCFC1P51610 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HCFC1P51610 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
HCFC1P51610 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.43□□□□□ -0.26
HCFC1P51610 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
HCFC1P51610 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HCFC1P51610 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HCFC1P51610 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.43□□□□□ -0.26
HCFC1P51610 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
HCFC1P51610 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HCFC1P51610 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
HCFC1P51610 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
HCFC1P51610 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.43□□□□□ -0.26
HCFC1P51610 AL603832.2-201ENST00000566195 2125 ntBASIC13.43□□□□□ -0.26
HCFC1P51610 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HCFC1P51610 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HCFC1P51610 AL138799.1-201ENST00000448213 1675 ntBASIC13.42□□□□□ -0.26
HCFC1P51610 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HCFC1P51610 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HCFC1P51610 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.42□□□□□ -0.26
HCFC1P51610 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HCFC1P51610 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms