Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.98□□□□□ -0.01
RAB28P51157 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.98□□□□□ -0.01
RAB28P51157 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.98□□□□□ -0.01
RAB28P51157 AC012645.4-201ENST00000610691 1061 ntBASIC14.98□□□□□ -0.01
RAB28P51157 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RAB28P51157 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB28P51157 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RAB28P51157 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB28P51157 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB28P51157 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB28P51157 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RAB28P51157 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB28P51157 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB28P51157 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.98□□□□□ -0.01
RAB28P51157 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB28P51157 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB28P51157 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB28P51157 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.97□□□□□ -0.01
RAB28P51157 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
RAB28P51157 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.97□□□□□ -0.01
RAB28P51157 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB28P51157 HYMAI-201ENST00000635591 3347 ntBASIC14.97□□□□□ -0.01
RAB28P51157 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RAB28P51157 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB28P51157 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RAB28P51157 C18orf15-201ENST00000623680 2534 ntBASIC14.97□□□□□ -0.01
RAB28P51157 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB28P51157 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
RAB28P51157 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
RAB28P51157 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB28P51157 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB28P51157 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB28P51157 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.97□□□□□ -0.01
RAB28P51157 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB28P51157 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.97□□□□□ -0.01
RAB28P51157 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.97□□□□□ -0.01
RAB28P51157 AC005034.1-201ENST00000426657 489 ntBASIC14.97□□□□□ -0.01
RAB28P51157 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.97□□□□□ -0.01
RAB28P51157 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB28P51157 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB28P51157 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.97□□□□□ -0.01
RAB28P51157 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.97□□□□□ -0.01
RAB28P51157 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.97□□□□□ -0.01
RAB28P51157 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.97□□□□□ -0.01
RAB28P51157 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.97□□□□□ -0.01
RAB28P51157 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.97□□□□□ -0.01
RAB28P51157 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.97□□□□□ -0.01
RAB28P51157 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.97□□□□□ -0.01
RAB28P51157 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB28P51157 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.97□□□□□ -0.01
RAB28P51157 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.97□□□□□ -0.01
RAB28P51157 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.97□□□□□ -0.01
RAB28P51157 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.97□□□□□ -0.01
RAB28P51157 CU634019.7-201ENST00000624153 1185 ntBASIC14.97□□□□□ -0.01
RAB28P51157 FP236241.2-201ENST00000624906 1185 ntBASIC14.97□□□□□ -0.01
RAB28P51157 KRT8P22-201ENST00000562317 1415 ntBASIC14.97□□□□□ -0.01
RAB28P51157 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB28P51157 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB28P51157 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.97□□□□□ -0.01
RAB28P51157 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB28P51157 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB28P51157 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB28P51157 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB28P51157 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB28P51157 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB28P51157 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.97□□□□□ -0.01
RAB28P51157 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB28P51157 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB28P51157 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB28P51157 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RAB28P51157 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RAB28P51157 AC112693.3-201ENST00000624819 1983 ntBASIC14.96□□□□□ -0.01
RAB28P51157 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB28P51157 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB28P51157 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB28P51157 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB28P51157 AC063926.2-201ENST00000623766 1308 ntBASIC14.96□□□□□ -0.01
RAB28P51157 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB28P51157 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.96□□□□□ -0.01
RAB28P51157 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB28P51157 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB28P51157 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.96□□□□□ -0.01
RAB28P51157 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB28P51157 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB28P51157 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RAB28P51157 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB28P51157 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB28P51157 COX5BP8-201ENST00000416911 349 ntBASIC14.96□□□□□ -0.01
RAB28P51157 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.96□□□□□ -0.01
RAB28P51157 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB28P51157 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RAB28P51157 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.96□□□□□ -0.01
RAB28P51157 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.96□□□□□ -0.01
RAB28P51157 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.96□□□□□ -0.01
RAB28P51157 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.96□□□□□ -0.01
RAB28P51157 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.96□□□□□ -0.01
RAB28P51157 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.96□□□□□ -0.01
RAB28P51157 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB28P51157 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB28P51157 AL138799.1-201ENST00000448213 1675 ntBASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms