Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF144AP50876 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RNF144AP50876 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF144AP50876 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF144AP50876 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF144AP50876 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.53□□□□□ -0.08
RNF144AP50876 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RNF144AP50876 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RNF144AP50876 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF144AP50876 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RNF144AP50876 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RNF144AP50876 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.53□□□□□ -0.08
RNF144AP50876 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF144AP50876 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF144AP50876 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF144AP50876 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF144AP50876 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RNF144AP50876 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RNF144AP50876 AC092580.3-201ENST00000430932 139 ntBASIC14.53□□□□□ -0.08
RNF144AP50876 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RNF144AP50876 TARDBPP1-201ENST00000442013 1203 ntBASIC14.53□□□□□ -0.08
RNF144AP50876 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.53□□□□□ -0.08
RNF144AP50876 AC069120.2-201ENST00000524091 540 ntBASIC14.53□□□□□ -0.08
RNF144AP50876 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.53□□□□□ -0.08
RNF144AP50876 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF144AP50876 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RNF144AP50876 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.53□□□□□ -0.08
RNF144AP50876 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.53□□□□□ -0.08
RNF144AP50876 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.53□□□□□ -0.08
RNF144AP50876 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.53□□□□□ -0.08
RNF144AP50876 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.53□□□□□ -0.08
RNF144AP50876 TEX28P1-201ENST00000613479 1221 ntBASIC14.53□□□□□ -0.08
RNF144AP50876 TEX28P2-201ENST00000617764 1221 ntBASIC14.53□□□□□ -0.08
RNF144AP50876 AL390754.1-201ENST00000619088 582 ntBASIC14.53□□□□□ -0.08
RNF144AP50876 AC073592.8-201ENST00000624126 511 ntBASIC14.53□□□□□ -0.08
RNF144AP50876 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF144AP50876 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF144AP50876 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF144AP50876 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF144AP50876 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.53□□□□□ -0.08
RNF144AP50876 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RNF144AP50876 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.53□□□□□ -0.08
RNF144AP50876 AL109954.1-202ENST00000564051 2148 ntBASIC14.53□□□□□ -0.08
RNF144AP50876 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF144AP50876 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF144AP50876 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.53□□□□□ -0.08
RNF144AP50876 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.53□□□□□ -0.08
RNF144AP50876 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RNF144AP50876 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
RNF144AP50876 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RNF144AP50876 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RNF144AP50876 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RNF144AP50876 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RNF144AP50876 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RNF144AP50876 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.52□□□□□ -0.08
RNF144AP50876 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.52□□□□□ -0.08
RNF144AP50876 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.52□□□□□ -0.08
RNF144AP50876 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RNF144AP50876 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RNF144AP50876 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RNF144AP50876 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
RNF144AP50876 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RNF144AP50876 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
RNF144AP50876 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.52□□□□□ -0.08
RNF144AP50876 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RNF144AP50876 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RNF144AP50876 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.52□□□□□ -0.08
RNF144AP50876 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RNF144AP50876 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
RNF144AP50876 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.52□□□□□ -0.08
RNF144AP50876 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
RNF144AP50876 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNF144AP50876 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
RNF144AP50876 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
RNF144AP50876 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNF144AP50876 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNF144AP50876 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.52□□□□□ -0.09
RNF144AP50876 SPDYE17-201ENST00000412399 783 ntBASIC14.52□□□□□ -0.09
RNF144AP50876 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.52□□□□□ -0.09
RNF144AP50876 AC074338.1-201ENST00000416825 156 ntBASIC14.52□□□□□ -0.09
RNF144AP50876 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.52□□□□□ -0.09
RNF144AP50876 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.52□□□□□ -0.09
RNF144AP50876 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RNF144AP50876 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.52□□□□□ -0.09
RNF144AP50876 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.52□□□□□ -0.09
RNF144AP50876 AC051619.7-201ENST00000568314 623 ntBASIC14.52□□□□□ -0.09
RNF144AP50876 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.52□□□□□ -0.09
RNF144AP50876 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.52□□□□□ -0.09
RNF144AP50876 AF228730.6-201ENST00000641497 218 ntBASIC14.52□□□□□ -0.09
RNF144AP50876 AC084121.3-201ENST00000641716 218 ntBASIC14.52□□□□□ -0.09
RNF144AP50876 AL109936.8-201ENST00000641772 604 ntBASIC14.52□□□□□ -0.09
RNF144AP50876 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.52□□□□□ -0.09
RNF144AP50876 AC112693.3-201ENST00000624819 1983 ntBASIC14.52□□□□□ -0.09
RNF144AP50876 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNF144AP50876 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNF144AP50876 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNF144AP50876 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
RNF144AP50876 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RNF144AP50876 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNF144AP50876 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms