Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SOX2P48431 KRT8P37-201ENST00000451609 1420 ntBASIC13.77□□□□□ -0.21
SOX2P48431 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.77□□□□□ -0.21
SOX2P48431 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SOX2P48431 PHKG1P2-201ENST00000457537 863 ntBASIC13.77□□□□□ -0.21
SOX2P48431 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.77□□□□□ -0.21
SOX2P48431 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SOX2P48431 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.77□□□□□ -0.21
SOX2P48431 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SOX2P48431 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.77□□□□□ -0.21
SOX2P48431 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC13.77□□□□□ -0.21
SOX2P48431 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.77□□□□□ -0.21
SOX2P48431 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SOX2P48431 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SOX2P48431 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.77□□□□□ -0.21
SOX2P48431 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.77□□□□□ -0.21
SOX2P48431 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.77□□□□□ -0.21
SOX2P48431 AC027307.2-201ENST00000591252 911 ntBASIC13.77□□□□□ -0.21
SOX2P48431 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.77□□□□□ -0.21
SOX2P48431 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.77□□□□□ -0.21
SOX2P48431 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
SOX2P48431 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC13.77□□□□□ -0.21
SOX2P48431 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
SOX2P48431 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SOX2P48431 AL513190.1-201ENST00000621254 727 ntBASIC13.77□□□□□ -0.21
SOX2P48431 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.77□□□□□ -0.21
SOX2P48431 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SOX2P48431 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SOX2P48431 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
SOX2P48431 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SOX2P48431 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SOX2P48431 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SOX2P48431 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SOX2P48431 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SOX2P48431 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SOX2P48431 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SOX2P48431 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SOX2P48431 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SOX2P48431 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SOX2P48431 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.76□□□□□ -0.21
SOX2P48431 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.76□□□□□ -0.21
SOX2P48431 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SOX2P48431 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SOX2P48431 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.76□□□□□ -0.21
SOX2P48431 CYP4F24P-201ENST00000586049 1580 ntBASIC13.76□□□□□ -0.21
SOX2P48431 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SOX2P48431 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.76□□□□□ -0.21
SOX2P48431 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SOX2P48431 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.76□□□□□ -0.21
SOX2P48431 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.76□□□□□ -0.21
SOX2P48431 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.76□□□□□ -0.21
SOX2P48431 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SOX2P48431 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
SOX2P48431 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.76□□□□□ -0.21
SOX2P48431 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.76□□□□□ -0.21
SOX2P48431 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SOX2P48431 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.76□□□□□ -0.21
SOX2P48431 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.76□□□□□ -0.21
SOX2P48431 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SOX2P48431 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.76□□□□□ -0.21
SOX2P48431 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.76□□□□□ -0.21
SOX2P48431 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.76□□□□□ -0.21
SOX2P48431 PDPK2P-202ENST00000562415 1191 ntBASIC13.76□□□□□ -0.21
SOX2P48431 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
SOX2P48431 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.76□□□□□ -0.21
SOX2P48431 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.76□□□□□ -0.21
SOX2P48431 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.76□□□□□ -0.21
SOX2P48431 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SOX2P48431 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SOX2P48431 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SOX2P48431 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.76□□□□□ -0.21
SOX2P48431 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
SOX2P48431 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SOX2P48431 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
SOX2P48431 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
SOX2P48431 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SOX2P48431 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.76□□□□□ -0.21
SOX2P48431 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SOX2P48431 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.76□□□□□ -0.21
SOX2P48431 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SOX2P48431 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
SOX2P48431 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SOX2P48431 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.76□□□□□ -0.21
SOX2P48431 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.76□□□□□ -0.21
SOX2P48431 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SOX2P48431 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SOX2P48431 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SOX2P48431 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SOX2P48431 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SOX2P48431 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SOX2P48431 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SOX2P48431 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.75□□□□□ -0.21
SOX2P48431 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SOX2P48431 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.75□□□□□ -0.21
SOX2P48431 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SOX2P48431 ZBED1P1-201ENST00000502364 1930 ntBASIC13.75□□□□□ -0.21
SOX2P48431 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SOX2P48431 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SOX2P48431 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SOX2P48431 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms