Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A1P43005 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SLC1A1P43005 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A1P43005 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A1P43005 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A1P43005 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC1A1P43005 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SLC1A1P43005 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A1P43005 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A1P43005 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A1P43005 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A1P43005 KRT18P64-201ENST00000434946 1219 ntBASIC16.29■□□□□ 0.2
SLC1A1P43005 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A1P43005 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A1P43005 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC1A1P43005 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC1A1P43005 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SLC1A1P43005 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC1A1P43005 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC1A1P43005 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC1A1P43005 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A1P43005 AC106881.1-201ENST00000605849 3329 ntBASIC16.29■□□□□ 0.2
SLC1A1P43005 REXO1L2P-201ENST00000425429 2069 ntBASIC16.29■□□□□ 0.2
SLC1A1P43005 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A1P43005 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A1P43005 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A1P43005 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A1P43005 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A1P43005 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SLC1A1P43005 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A1P43005 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A1P43005 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A1P43005 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A1P43005 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A1P43005 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.29■□□□□ 0.2
SLC1A1P43005 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC1A1P43005 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC1A1P43005 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A1P43005 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A1P43005 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A1P43005 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC1A1P43005 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A1P43005 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A1P43005 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A1P43005 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SLC1A1P43005 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A1P43005 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A1P43005 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A1P43005 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A1P43005 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SLC1A1P43005 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A1P43005 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A1P43005 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SLC1A1P43005 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
SLC1A1P43005 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A1P43005 ACE3P-201ENST00000423435 1973 ntBASIC16.28■□□□□ 0.2
SLC1A1P43005 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC1A1P43005 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A1P43005 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A1P43005 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A1P43005 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC1A1P43005 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A1P43005 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A1P43005 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SLC1A1P43005 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC1A1P43005 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A1P43005 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SLC1A1P43005 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.28■□□□□ 0.2
SLC1A1P43005 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.28■□□□□ 0.2
SLC1A1P43005 SNHG9-202ENST00000564014 471 ntBASIC16.28■□□□□ 0.2
SLC1A1P43005 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC1A1P43005 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SLC1A1P43005 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC1A1P43005 AC074044.1-201ENST00000609673 707 ntBASIC16.28■□□□□ 0.2
SLC1A1P43005 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC1A1P43005 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC1A1P43005 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A1P43005 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A1P43005 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC1A1P43005 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A1P43005 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A1P43005 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SLC1A1P43005 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC1A1P43005 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A1P43005 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A1P43005 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A1P43005 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SLC1A1P43005 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SLC1A1P43005 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC1A1P43005 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC1A1P43005 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC1A1P43005 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC1A1P43005 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.27■□□□□ 0.2
SLC1A1P43005 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.27■□□□□ 0.2
SLC1A1P43005 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC1A1P43005 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SLC1A1P43005 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
SLC1A1P43005 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SLC1A1P43005 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
SLC1A1P43005 AC104457.1-201ENST00000401024 814 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms