Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MDH1P40925 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
MDH1P40925 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MDH1P40925 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.66■□□□□ 0.1
MDH1P40925 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.66■□□□□ 0.1
MDH1P40925 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
MDH1P40925 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MDH1P40925 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
MDH1P40925 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MDH1P40925 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.66■□□□□ 0.1
MDH1P40925 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MDH1P40925 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MDH1P40925 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
MDH1P40925 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MDH1P40925 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
MDH1P40925 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
MDH1P40925 RCN1P1-201ENST00000400413 996 ntBASIC15.66■□□□□ 0.1
MDH1P40925 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MDH1P40925 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.66■□□□□ 0.1
MDH1P40925 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.66■□□□□ 0.1
MDH1P40925 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
MDH1P40925 KRT16P4-201ENST00000453883 522 ntBASIC15.66■□□□□ 0.1
MDH1P40925 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.66■□□□□ 0.1
MDH1P40925 AP000867.3-201ENST00000524675 377 ntBASIC15.66■□□□□ 0.1
MDH1P40925 SART3-203ENST00000546611 1184 ntBASIC15.66■□□□□ 0.1
MDH1P40925 AC012615.1-201ENST00000565797 1299 ntBASIC15.66■□□□□ 0.1
MDH1P40925 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.66■□□□□ 0.1
MDH1P40925 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.66■□□□□ 0.1
MDH1P40925 AC006557.2-201ENST00000592985 1240 ntBASIC15.66■□□□□ 0.1
MDH1P40925 MTDHP3-201ENST00000594186 672 ntBASIC15.66■□□□□ 0.1
MDH1P40925 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.66■□□□□ 0.1
MDH1P40925 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.66■□□□□ 0.1
MDH1P40925 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.66■□□□□ 0.1
MDH1P40925 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.66■□□□□ 0.1
MDH1P40925 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.66■□□□□ 0.1
MDH1P40925 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MDH1P40925 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
MDH1P40925 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
MDH1P40925 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
MDH1P40925 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
MDH1P40925 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MDH1P40925 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.66■□□□□ 0.1
MDH1P40925 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
MDH1P40925 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.66■□□□□ 0.1
MDH1P40925 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
MDH1P40925 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MDH1P40925 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC15.66■□□□□ 0.1
MDH1P40925 AC023090.2-201ENST00000625182 2110 ntBASIC15.65■□□□□ 0.1
MDH1P40925 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MDH1P40925 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MDH1P40925 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MDH1P40925 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
MDH1P40925 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
MDH1P40925 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
MDH1P40925 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MDH1P40925 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
MDH1P40925 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MDH1P40925 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
MDH1P40925 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
MDH1P40925 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
MDH1P40925 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.65■□□□□ 0.1
MDH1P40925 FAM185BP-201ENST00000443595 716 ntBASIC15.65■□□□□ 0.1
MDH1P40925 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
MDH1P40925 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.65■□□□□ 0.1
MDH1P40925 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.65■□□□□ 0.1
MDH1P40925 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.65■□□□□ 0.1
MDH1P40925 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.65■□□□□ 0.1
MDH1P40925 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.65■□□□□ 0.1
MDH1P40925 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.65■□□□□ 0.1
MDH1P40925 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.65■□□□□ 0.1
MDH1P40925 AC008667.4-201ENST00000607370 168 ntBASIC15.65■□□□□ 0.1
MDH1P40925 AL078644.1-201ENST00000609881 752 ntBASIC15.65■□□□□ 0.1
MDH1P40925 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.65■□□□□ 0.1
MDH1P40925 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
MDH1P40925 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MDH1P40925 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MDH1P40925 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
MDH1P40925 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
MDH1P40925 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MDH1P40925 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
MDH1P40925 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MDH1P40925 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MDH1P40925 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC15.65■□□□□ 0.1
MDH1P40925 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.65■□□□□ 0.1
MDH1P40925 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MDH1P40925 AC005332.1-201ENST00000577698 1310 ntBASIC15.65■□□□□ 0.1
MDH1P40925 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.65■□□□□ 0.1
MDH1P40925 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MDH1P40925 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MDH1P40925 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.65■□□□□ 0.1
MDH1P40925 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MDH1P40925 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
MDH1P40925 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.64■□□□□ 0.1
MDH1P40925 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
MDH1P40925 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
MDH1P40925 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MDH1P40925 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
MDH1P40925 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.64■□□□□ 0.09
MDH1P40925 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MDH1P40925 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms