Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CEACAM3P40198 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CEACAM3P40198 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CEACAM3P40198 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.74□□□□□ -0.37
CEACAM3P40198 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CEACAM3P40198 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC12.74□□□□□ -0.37
CEACAM3P40198 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
CEACAM3P40198 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.74□□□□□ -0.37
CEACAM3P40198 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
CEACAM3P40198 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CEACAM3P40198 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CEACAM3P40198 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CEACAM3P40198 CASK-202ENST00000378158 3848 ntTSL 5 BASIC12.74□□□□□ -0.37
CEACAM3P40198 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.74□□□□□ -0.37
CEACAM3P40198 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CEACAM3P40198 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CEACAM3P40198 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.74□□□□□ -0.37
CEACAM3P40198 TOMM22P5-201ENST00000416399 439 ntBASIC12.74□□□□□ -0.37
CEACAM3P40198 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC12.74□□□□□ -0.37
CEACAM3P40198 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.74□□□□□ -0.37
CEACAM3P40198 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.74□□□□□ -0.37
CEACAM3P40198 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CEACAM3P40198 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.74□□□□□ -0.37
CEACAM3P40198 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CEACAM3P40198 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.74□□□□□ -0.37
CEACAM3P40198 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.74□□□□□ -0.37
CEACAM3P40198 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC12.74□□□□□ -0.37
CEACAM3P40198 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.74□□□□□ -0.37
CEACAM3P40198 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CEACAM3P40198 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CEACAM3P40198 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CEACAM3P40198 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CEACAM3P40198 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CEACAM3P40198 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CEACAM3P40198 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
CEACAM3P40198 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CEACAM3P40198 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CEACAM3P40198 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CEACAM3P40198 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC12.74□□□□□ -0.37
CEACAM3P40198 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CEACAM3P40198 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CEACAM3P40198 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.73□□□□□ -0.37
CEACAM3P40198 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.73□□□□□ -0.37
CEACAM3P40198 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CEACAM3P40198 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CEACAM3P40198 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CEACAM3P40198 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CEACAM3P40198 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CEACAM3P40198 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CEACAM3P40198 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CEACAM3P40198 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC12.73□□□□□ -0.37
CEACAM3P40198 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CEACAM3P40198 AGK-211ENST00000629555 2765 ntTSL 5 BASIC12.73□□□□□ -0.37
CEACAM3P40198 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.73□□□□□ -0.37
CEACAM3P40198 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CEACAM3P40198 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CEACAM3P40198 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CEACAM3P40198 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CEACAM3P40198 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC12.73□□□□□ -0.37
CEACAM3P40198 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CEACAM3P40198 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.73□□□□□ -0.37
CEACAM3P40198 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.73□□□□□ -0.37
CEACAM3P40198 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.73□□□□□ -0.37
CEACAM3P40198 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CEACAM3P40198 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.73□□□□□ -0.37
CEACAM3P40198 RPL5P21-201ENST00000404620 815 ntBASIC12.73□□□□□ -0.37
CEACAM3P40198 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.73□□□□□ -0.37
CEACAM3P40198 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.73□□□□□ -0.37
CEACAM3P40198 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.73□□□□□ -0.37
CEACAM3P40198 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC12.73□□□□□ -0.37
CEACAM3P40198 TSPY16P-201ENST00000449843 468 ntBASIC12.73□□□□□ -0.37
CEACAM3P40198 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CEACAM3P40198 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC12.73□□□□□ -0.37
CEACAM3P40198 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CEACAM3P40198 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.73□□□□□ -0.37
CEACAM3P40198 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CEACAM3P40198 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC12.73□□□□□ -0.37
CEACAM3P40198 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CEACAM3P40198 SPCS2P1-201ENST00000561636 679 ntBASIC12.73□□□□□ -0.37
CEACAM3P40198 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CEACAM3P40198 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CEACAM3P40198 INO80C-206ENST00000586489 594 ntTSL 3 BASIC12.73□□□□□ -0.37
CEACAM3P40198 SRD5A3P1-201ENST00000603021 949 ntBASIC12.73□□□□□ -0.37
CEACAM3P40198 AC008738.7-201ENST00000609744 511 ntBASIC12.73□□□□□ -0.37
CEACAM3P40198 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.73□□□□□ -0.37
CEACAM3P40198 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.73□□□□□ -0.37
CEACAM3P40198 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.73□□□□□ -0.37
CEACAM3P40198 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.73□□□□□ -0.37
CEACAM3P40198 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CEACAM3P40198 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CEACAM3P40198 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
CEACAM3P40198 AC007950.2-201ENST00000615045 2347 ntBASIC12.73□□□□□ -0.37
CEACAM3P40198 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CEACAM3P40198 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CEACAM3P40198 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CEACAM3P40198 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CEACAM3P40198 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CEACAM3P40198 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CEACAM3P40198 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.73□□□□□ -0.37
CEACAM3P40198 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms