Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CLCN1P35523 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.76■□□□□ 0.43
CLCN1P35523 KRT18P2-201ENST00000447938 1258 ntBASIC17.76■□□□□ 0.43
CLCN1P35523 RPL13AP23-201ENST00000480739 586 ntBASIC17.76■□□□□ 0.43
CLCN1P35523 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.76■□□□□ 0.43
CLCN1P35523 AL031432.2-201ENST00000566714 459 ntBASIC17.76■□□□□ 0.43
CLCN1P35523 AL928711.1-201ENST00000570165 459 ntBASIC17.76■□□□□ 0.43
CLCN1P35523 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.76■□□□□ 0.43
CLCN1P35523 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CLCN1P35523 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.76■□□□□ 0.43
CLCN1P35523 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN1P35523 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC17.76■□□□□ 0.43
CLCN1P35523 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN1P35523 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC17.76■□□□□ 0.43
CLCN1P35523 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN1P35523 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN1P35523 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN1P35523 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.76■□□□□ 0.43
CLCN1P35523 RDX-218ENST00000544551 4117 ntTSL 2 BASIC17.76■□□□□ 0.43
CLCN1P35523 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN1P35523 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN1P35523 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN1P35523 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN1P35523 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN1P35523 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN1P35523 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CLCN1P35523 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC17.75■□□□□ 0.43
CLCN1P35523 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN1P35523 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN1P35523 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN1P35523 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN1P35523 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN1P35523 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CLCN1P35523 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
CLCN1P35523 TNN-203ENST00000622870 3719 ntTSL 5 BASIC17.75■□□□□ 0.43
CLCN1P35523 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN1P35523 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN1P35523 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN1P35523 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC17.75■□□□□ 0.43
CLCN1P35523 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN1P35523 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CLCN1P35523 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.75■□□□□ 0.43
CLCN1P35523 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.75■□□□□ 0.43
CLCN1P35523 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.75■□□□□ 0.43
CLCN1P35523 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.75■□□□□ 0.43
CLCN1P35523 AL645728.2-201ENST00000641974 660 ntBASIC17.75■□□□□ 0.43
CLCN1P35523 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN1P35523 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN1P35523 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
CLCN1P35523 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN1P35523 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.75■□□□□ 0.43
CLCN1P35523 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.75■□□□□ 0.43
CLCN1P35523 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN1P35523 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CLCN1P35523 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CLCN1P35523 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.75■□□□□ 0.43
CLCN1P35523 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN1P35523 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN1P35523 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN1P35523 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN1P35523 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN1P35523 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN1P35523 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
CLCN1P35523 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN1P35523 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN1P35523 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN1P35523 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN1P35523 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.74■□□□□ 0.43
CLCN1P35523 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN1P35523 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN1P35523 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN1P35523 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CLCN1P35523 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN1P35523 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC17.74■□□□□ 0.43
CLCN1P35523 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN1P35523 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN1P35523 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC17.74■□□□□ 0.43
CLCN1P35523 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN1P35523 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC17.74■□□□□ 0.43
CLCN1P35523 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CLCN1P35523 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN1P35523 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN1P35523 FAM8A3P-201ENST00000427218 844 ntBASIC17.74■□□□□ 0.43
CLCN1P35523 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.74■□□□□ 0.43
CLCN1P35523 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.74■□□□□ 0.43
CLCN1P35523 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.74■□□□□ 0.43
CLCN1P35523 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.74■□□□□ 0.43
CLCN1P35523 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.74■□□□□ 0.43
CLCN1P35523 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.74■□□□□ 0.43
CLCN1P35523 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN1P35523 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN1P35523 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN1P35523 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CLCN1P35523 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN1P35523 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN1P35523 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN1P35523 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN1P35523 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17.74■□□□□ 0.43
CLCN1P35523 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.74■□□□□ 0.43
CLCN1P35523 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms