Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SLC6A4P31645 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A4P31645 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A4P31645 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A4P31645 AC087481.3-201ENST00000602886 1894 ntBASIC15.88■□□□□ 0.13
SLC6A4P31645 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A4P31645 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A4P31645 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A4P31645 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A4P31645 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.88■□□□□ 0.13
SLC6A4P31645 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.88■□□□□ 0.13
SLC6A4P31645 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A4P31645 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A4P31645 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A4P31645 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.88■□□□□ 0.13
SLC6A4P31645 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
SLC6A4P31645 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A4P31645 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A4P31645 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SLC6A4P31645 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.88■□□□□ 0.13
SLC6A4P31645 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC6A4P31645 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A4P31645 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SLC6A4P31645 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A4P31645 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC6A4P31645 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A4P31645 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A4P31645 ACKR1-201ENST00000368121 1240 ntBASIC15.88■□□□□ 0.13
SLC6A4P31645 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A4P31645 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.88■□□□□ 0.13
SLC6A4P31645 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A4P31645 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC6A4P31645 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.88■□□□□ 0.13
SLC6A4P31645 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC6A4P31645 SNX29P1-201ENST00000548357 1007 ntBASIC15.88■□□□□ 0.13
SLC6A4P31645 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC6A4P31645 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A4P31645 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC6A4P31645 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.88■□□□□ 0.13
SLC6A4P31645 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.88■□□□□ 0.13
SLC6A4P31645 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
SLC6A4P31645 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.88■□□□□ 0.13
SLC6A4P31645 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.88■□□□□ 0.13
SLC6A4P31645 BX539320.1-201ENST00000623759 877 ntBASIC15.88■□□□□ 0.13
SLC6A4P31645 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SLC6A4P31645 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A4P31645 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A4P31645 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A4P31645 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A4P31645 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
SLC6A4P31645 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A4P31645 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC6A4P31645 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SLC6A4P31645 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC6A4P31645 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A4P31645 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A4P31645 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A4P31645 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A4P31645 AC007787.1-201ENST00000588095 1583 ntBASIC15.87■□□□□ 0.13
SLC6A4P31645 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.87■□□□□ 0.13
SLC6A4P31645 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A4P31645 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A4P31645 AC046158.3-201ENST00000624947 2558 ntBASIC15.87■□□□□ 0.13
SLC6A4P31645 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A4P31645 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A4P31645 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A4P31645 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.87■□□□□ 0.13
SLC6A4P31645 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SLC6A4P31645 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A4P31645 PKD1P5-201ENST00000532415 10291 ntBASIC15.87■□□□□ 0.13
SLC6A4P31645 SSR4P1-203ENST00000599569 2260 ntBASIC15.87■□□□□ 0.13
SLC6A4P31645 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A4P31645 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
SLC6A4P31645 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A4P31645 RNU1-114P-201ENST00000365297 166 ntBASIC15.87■□□□□ 0.13
SLC6A4P31645 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
SLC6A4P31645 AC005229.1-201ENST00000392885 409 ntBASIC15.87■□□□□ 0.13
SLC6A4P31645 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SLC6A4P31645 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A4P31645 MIR1909-201ENST00000411312 80 ntBASIC15.87■□□□□ 0.13
SLC6A4P31645 ATP5G2P4-201ENST00000442175 420 ntBASIC15.87■□□□□ 0.13
SLC6A4P31645 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A4P31645 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.87■□□□□ 0.13
SLC6A4P31645 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.87■□□□□ 0.13
SLC6A4P31645 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.87■□□□□ 0.13
SLC6A4P31645 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.87■□□□□ 0.13
SLC6A4P31645 AL645728.2-202ENST00000641679 227 ntBASIC15.87■□□□□ 0.13
SLC6A4P31645 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A4P31645 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A4P31645 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SLC6A4P31645 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A4P31645 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A4P31645 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SLC6A4P31645 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.87■□□□□ 0.13
SLC6A4P31645 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A4P31645 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.87■□□□□ 0.13
SLC6A4P31645 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A4P31645 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A4P31645 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
SLC6A4P31645 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms