Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHC1P29353 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SHC1P29353 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.31□□□□□ -0.12
SHC1P29353 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.31□□□□□ -0.12
SHC1P29353 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHC1P29353 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHC1P29353 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHC1P29353 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SHC1P29353 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHC1P29353 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHC1P29353 AC074338.1-201ENST00000416825 156 ntBASIC14.31□□□□□ -0.12
SHC1P29353 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.31□□□□□ -0.12
SHC1P29353 AL512638.1-201ENST00000457493 794 ntBASIC14.31□□□□□ -0.12
SHC1P29353 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.31□□□□□ -0.12
SHC1P29353 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.31□□□□□ -0.12
SHC1P29353 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.31□□□□□ -0.12
SHC1P29353 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHC1P29353 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.31□□□□□ -0.12
SHC1P29353 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHC1P29353 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHC1P29353 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHC1P29353 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.31□□□□□ -0.12
SHC1P29353 AC004840.1-201ENST00000636359 365 ntBASIC14.31□□□□□ -0.12
SHC1P29353 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.31□□□□□ -0.12
SHC1P29353 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHC1P29353 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.31□□□□□ -0.12
SHC1P29353 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHC1P29353 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.31□□□□□ -0.12
SHC1P29353 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHC1P29353 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHC1P29353 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.31□□□□□ -0.12
SHC1P29353 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.31□□□□□ -0.12
SHC1P29353 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.31□□□□□ -0.12
SHC1P29353 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SHC1P29353 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHC1P29353 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHC1P29353 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHC1P29353 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHC1P29353 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHC1P29353 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHC1P29353 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.3□□□□□ -0.12
SHC1P29353 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.3□□□□□ -0.12
SHC1P29353 AC022144.1-201ENST00000602255 1580 ntBASIC14.3□□□□□ -0.12
SHC1P29353 AL607033.1-201ENST00000623900 1599 ntBASIC14.3□□□□□ -0.12
SHC1P29353 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHC1P29353 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SHC1P29353 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHC1P29353 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.3□□□□□ -0.12
SHC1P29353 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SHC1P29353 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHC1P29353 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SHC1P29353 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHC1P29353 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.3□□□□□ -0.12
SHC1P29353 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHC1P29353 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.3□□□□□ -0.12
SHC1P29353 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHC1P29353 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHC1P29353 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.3□□□□□ -0.12
SHC1P29353 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SHC1P29353 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHC1P29353 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHC1P29353 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHC1P29353 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SHC1P29353 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHC1P29353 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
SHC1P29353 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.3□□□□□ -0.12
SHC1P29353 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.3□□□□□ -0.12
SHC1P29353 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.3□□□□□ -0.12
SHC1P29353 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHC1P29353 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHC1P29353 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.3□□□□□ -0.12
SHC1P29353 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.3□□□□□ -0.12
SHC1P29353 TARDBPP1-201ENST00000442013 1203 ntBASIC14.3□□□□□ -0.12
SHC1P29353 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SHC1P29353 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.3□□□□□ -0.12
SHC1P29353 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.3□□□□□ -0.12
SHC1P29353 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SHC1P29353 INGX-202ENST00000489074 768 ntBASIC14.3□□□□□ -0.12
SHC1P29353 SPDYE18-201ENST00000510091 1050 ntBASIC14.3□□□□□ -0.12
SHC1P29353 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.3□□□□□ -0.12
SHC1P29353 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.3□□□□□ -0.12
SHC1P29353 SPCS2P1-201ENST00000561636 679 ntBASIC14.3□□□□□ -0.12
SHC1P29353 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.3□□□□□ -0.12
SHC1P29353 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.3□□□□□ -0.12
SHC1P29353 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.3□□□□□ -0.12
SHC1P29353 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SHC1P29353 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHC1P29353 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHC1P29353 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHC1P29353 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.3□□□□□ -0.12
SHC1P29353 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.3□□□□□ -0.12
SHC1P29353 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHC1P29353 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.3□□□□□ -0.12
SHC1P29353 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SHC1P29353 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHC1P29353 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHC1P29353 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SHC1P29353 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SHC1P29353 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SHC1P29353 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms