Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.33□□□□□ -0.12
ABCD3P28288 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.33□□□□□ -0.12
ABCD3P28288 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.33□□□□□ -0.12
ABCD3P28288 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
ABCD3P28288 AC092552.1-201ENST00000547243 906 ntBASIC14.33□□□□□ -0.12
ABCD3P28288 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ABCD3P28288 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.33□□□□□ -0.12
ABCD3P28288 WASH4P-201ENST00000564273 1246 ntBASIC14.33□□□□□ -0.12
ABCD3P28288 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.33□□□□□ -0.12
ABCD3P28288 BRI3BPP1-201ENST00000594224 787 ntBASIC14.33□□□□□ -0.12
ABCD3P28288 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.33□□□□□ -0.12
ABCD3P28288 TMEM261P1-201ENST00000604899 340 ntBASIC14.33□□□□□ -0.12
ABCD3P28288 AC025181.2-201ENST00000606994 802 ntBASIC14.33□□□□□ -0.12
ABCD3P28288 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ABCD3P28288 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.33□□□□□ -0.12
ABCD3P28288 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.33□□□□□ -0.12
ABCD3P28288 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ABCD3P28288 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ABCD3P28288 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ABCD3P28288 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
ABCD3P28288 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ABCD3P28288 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.33□□□□□ -0.12
ABCD3P28288 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ABCD3P28288 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ABCD3P28288 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ABCD3P28288 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ABCD3P28288 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ABCD3P28288 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ABCD3P28288 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ABCD3P28288 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ABCD3P28288 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ABCD3P28288 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ABCD3P28288 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ABCD3P28288 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ABCD3P28288 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ABCD3P28288 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
ABCD3P28288 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
ABCD3P28288 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
ABCD3P28288 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ABCD3P28288 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.32□□□□□ -0.12
ABCD3P28288 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.32□□□□□ -0.12
ABCD3P28288 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ABCD3P28288 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ABCD3P28288 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ABCD3P28288 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.32□□□□□ -0.12
ABCD3P28288 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ABCD3P28288 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ABCD3P28288 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ABCD3P28288 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ABCD3P28288 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ABCD3P28288 AL442647.2-201ENST00000429864 857 ntBASIC14.32□□□□□ -0.12
ABCD3P28288 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ABCD3P28288 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.32□□□□□ -0.12
ABCD3P28288 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.32□□□□□ -0.12
ABCD3P28288 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.32□□□□□ -0.12
ABCD3P28288 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.32□□□□□ -0.12
ABCD3P28288 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.32□□□□□ -0.12
ABCD3P28288 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.32□□□□□ -0.12
ABCD3P28288 AC025048.6-201ENST00000634326 1161 ntBASIC14.32□□□□□ -0.12
ABCD3P28288 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ABCD3P28288 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ABCD3P28288 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ABCD3P28288 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ABCD3P28288 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ABCD3P28288 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
ABCD3P28288 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ABCD3P28288 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
ABCD3P28288 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
ABCD3P28288 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ABCD3P28288 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.32□□□□□ -0.12
ABCD3P28288 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.32□□□□□ -0.12
ABCD3P28288 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ABCD3P28288 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ABCD3P28288 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ABCD3P28288 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ABCD3P28288 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ABCD3P28288 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
ABCD3P28288 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.31□□□□□ -0.12
ABCD3P28288 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
ABCD3P28288 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ABCD3P28288 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ABCD3P28288 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ABCD3P28288 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ABCD3P28288 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ABCD3P28288 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.31□□□□□ -0.12
ABCD3P28288 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ABCD3P28288 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ABCD3P28288 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
ABCD3P28288 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.31□□□□□ -0.12
ABCD3P28288 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ABCD3P28288 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ABCD3P28288 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ABCD3P28288 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.31□□□□□ -0.12
ABCD3P28288 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ABCD3P28288 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
ABCD3P28288 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ABCD3P28288 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ABCD3P28288 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ABCD3P28288 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ABCD3P28288 DGCR5-201ENST00000399539 862 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms