Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 KRT8P44-201ENST00000441609 1350 ntBASIC13.58□□□□□ -0.24
ACKR3P25106 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ACKR3P25106 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ACKR3P25106 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ACKR3P25106 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ACKR3P25106 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ACKR3P25106 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.57□□□□□ -0.24
ACKR3P25106 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.57□□□□□ -0.24
ACKR3P25106 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
ACKR3P25106 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.57□□□□□ -0.24
ACKR3P25106 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ACKR3P25106 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.57□□□□□ -0.24
ACKR3P25106 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ACKR3P25106 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
ACKR3P25106 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ACKR3P25106 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ACKR3P25106 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
ACKR3P25106 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ACKR3P25106 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ACKR3P25106 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ACKR3P25106 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ACKR3P25106 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.57□□□□□ -0.24
ACKR3P25106 KRT18P13-201ENST00000400056 1290 ntBASIC13.57□□□□□ -0.24
ACKR3P25106 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.57□□□□□ -0.24
ACKR3P25106 AL080243.2-201ENST00000418783 582 ntBASIC13.57□□□□□ -0.24
ACKR3P25106 AL645939.2-201ENST00000427340 991 ntBASIC13.57□□□□□ -0.24
ACKR3P25106 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.57□□□□□ -0.24
ACKR3P25106 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.57□□□□□ -0.24
ACKR3P25106 AC109322.1-201ENST00000524499 1264 ntBASIC13.57□□□□□ -0.24
ACKR3P25106 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.57□□□□□ -0.24
ACKR3P25106 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.57□□□□□ -0.24
ACKR3P25106 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.57□□□□□ -0.24
ACKR3P25106 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.57□□□□□ -0.24
ACKR3P25106 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.57□□□□□ -0.24
ACKR3P25106 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.57□□□□□ -0.24
ACKR3P25106 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ACKR3P25106 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ACKR3P25106 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.57□□□□□ -0.24
ACKR3P25106 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ACKR3P25106 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.57□□□□□ -0.24
ACKR3P25106 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
ACKR3P25106 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.57□□□□□ -0.24
ACKR3P25106 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
ACKR3P25106 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
ACKR3P25106 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ACKR3P25106 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ACKR3P25106 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ACKR3P25106 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ACKR3P25106 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.57□□□□□ -0.24
ACKR3P25106 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ACKR3P25106 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ACKR3P25106 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
ACKR3P25106 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ACKR3P25106 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
ACKR3P25106 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ACKR3P25106 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ACKR3P25106 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
ACKR3P25106 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
ACKR3P25106 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
ACKR3P25106 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
ACKR3P25106 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ACKR3P25106 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
ACKR3P25106 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
ACKR3P25106 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ACKR3P25106 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
ACKR3P25106 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ACKR3P25106 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ACKR3P25106 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ACKR3P25106 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
ACKR3P25106 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ACKR3P25106 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ACKR3P25106 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
ACKR3P25106 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ACKR3P25106 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ACKR3P25106 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.56□□□□□ -0.24
ACKR3P25106 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ACKR3P25106 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ACKR3P25106 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ACKR3P25106 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
ACKR3P25106 AL139400.1-201ENST00000366220 510 ntBASIC13.56□□□□□ -0.24
ACKR3P25106 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ACKR3P25106 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
ACKR3P25106 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ACKR3P25106 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.56□□□□□ -0.24
ACKR3P25106 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.56□□□□□ -0.24
ACKR3P25106 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.56□□□□□ -0.24
ACKR3P25106 TARDBPP1-201ENST00000442013 1203 ntBASIC13.56□□□□□ -0.24
ACKR3P25106 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.56□□□□□ -0.24
ACKR3P25106 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.56□□□□□ -0.24
ACKR3P25106 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ACKR3P25106 HLA-J-203ENST00000494367 1087 ntBASIC13.56□□□□□ -0.24
ACKR3P25106 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.56□□□□□ -0.24
ACKR3P25106 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
ACKR3P25106 AC069262.1-201ENST00000539058 672 ntBASIC13.56□□□□□ -0.24
ACKR3P25106 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.56□□□□□ -0.24
ACKR3P25106 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.56□□□□□ -0.24
ACKR3P25106 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.56□□□□□ -0.24
ACKR3P25106 AL589739.1-201ENST00000607720 493 ntBASIC13.56□□□□□ -0.24
ACKR3P25106 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ACKR3P25106 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms