Protein–RNA interactions for Protein: P20783

NTF3, Neurotrophin-3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTF3P20783 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NTF3P20783 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC11.92□□□□□ -0.5
NTF3P20783 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NTF3P20783 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
NTF3P20783 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
NTF3P20783 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NTF3P20783 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NTF3P20783 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NTF3P20783 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NTF3P20783 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NTF3P20783 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
NTF3P20783 ARMC10P1-201ENST00000313754 855 ntBASIC11.92□□□□□ -0.5
NTF3P20783 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NTF3P20783 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
NTF3P20783 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
NTF3P20783 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC11.92□□□□□ -0.5
NTF3P20783 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC11.92□□□□□ -0.5
NTF3P20783 HCG4-201ENST00000418983 998 ntBASIC11.92□□□□□ -0.5
NTF3P20783 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC11.92□□□□□ -0.5
NTF3P20783 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC11.92□□□□□ -0.5
NTF3P20783 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC11.92□□□□□ -0.5
NTF3P20783 AC104819.1-201ENST00000504587 486 ntBASIC11.92□□□□□ -0.5
NTF3P20783 LTBR-211ENST00000543190 785 ntTSL 3 BASIC11.92□□□□□ -0.5
NTF3P20783 IL11-204ENST00000590625 1028 ntTSL 2 BASIC11.92□□□□□ -0.5
NTF3P20783 AC092329.2-201ENST00000598402 547 ntBASIC11.92□□□□□ -0.5
NTF3P20783 WT1-AS_2.1-201ENST00000613208 137 ntBASIC11.92□□□□□ -0.5
NTF3P20783 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
NTF3P20783 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NTF3P20783 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
NTF3P20783 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NTF3P20783 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NTF3P20783 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC11.92□□□□□ -0.5
NTF3P20783 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC11.92□□□□□ -0.5
NTF3P20783 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC11.92□□□□□ -0.5
NTF3P20783 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NTF3P20783 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NTF3P20783 AC140479.7-201ENST00000636301 2332 ntBASIC11.92□□□□□ -0.5
NTF3P20783 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
NTF3P20783 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
NTF3P20783 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NTF3P20783 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC11.92□□□□□ -0.5
NTF3P20783 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
NTF3P20783 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NTF3P20783 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
NTF3P20783 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
NTF3P20783 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NTF3P20783 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
NTF3P20783 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC11.92□□□□□ -0.5
NTF3P20783 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC11.92□□□□□ -0.5
NTF3P20783 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NTF3P20783 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC11.91□□□□□ -0.5
NTF3P20783 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NTF3P20783 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NTF3P20783 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
NTF3P20783 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC11.91□□□□□ -0.5
NTF3P20783 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NTF3P20783 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NTF3P20783 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
NTF3P20783 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
NTF3P20783 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NTF3P20783 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
NTF3P20783 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
NTF3P20783 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
NTF3P20783 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
NTF3P20783 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NTF3P20783 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
NTF3P20783 Z82170.1-201ENST00000625081 3192 ntBASIC11.91□□□□□ -0.5
NTF3P20783 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NTF3P20783 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
NTF3P20783 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NTF3P20783 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC11.91□□□□□ -0.5
NTF3P20783 PTCHD3P3-201ENST00000403073 906 ntBASIC11.91□□□□□ -0.5
NTF3P20783 HAUS4P1-201ENST00000406739 1145 ntBASIC11.91□□□□□ -0.5
NTF3P20783 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC11.91□□□□□ -0.5
NTF3P20783 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC11.91□□□□□ -0.5
NTF3P20783 SLC25A6P2-201ENST00000497974 877 ntBASIC11.91□□□□□ -0.5
NTF3P20783 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
NTF3P20783 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC11.91□□□□□ -0.5
NTF3P20783 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC11.91□□□□□ -0.5
NTF3P20783 AC005412.3-201ENST00000580309 715 ntBASIC11.91□□□□□ -0.5
NTF3P20783 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC11.91□□□□□ -0.5
NTF3P20783 AP002414.4-201ENST00000589764 1148 ntBASIC11.91□□□□□ -0.5
NTF3P20783 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC11.91□□□□□ -0.5
NTF3P20783 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
NTF3P20783 AL591684.3-201ENST00000605187 298 ntBASIC11.91□□□□□ -0.5
NTF3P20783 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC11.91□□□□□ -0.5
NTF3P20783 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NTF3P20783 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC11.91□□□□□ -0.5
NTF3P20783 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
NTF3P20783 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NTF3P20783 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
NTF3P20783 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NTF3P20783 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NTF3P20783 AC090616.6-203ENST00000579186 1945 ntBASIC11.91□□□□□ -0.5
NTF3P20783 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
NTF3P20783 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
NTF3P20783 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
NTF3P20783 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NTF3P20783 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NTF3P20783 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms