Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.56■□□□□ 0.08
XRCC1P18887 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.56■□□□□ 0.08
XRCC1P18887 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
XRCC1P18887 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
XRCC1P18887 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.56■□□□□ 0.08
XRCC1P18887 AC091951.1-201ENST00000512854 2465 ntBASIC15.56■□□□□ 0.08
XRCC1P18887 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.56■□□□□ 0.08
XRCC1P18887 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
XRCC1P18887 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.56■□□□□ 0.08
XRCC1P18887 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
XRCC1P18887 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
XRCC1P18887 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
XRCC1P18887 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
XRCC1P18887 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.56■□□□□ 0.08
XRCC1P18887 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
XRCC1P18887 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
XRCC1P18887 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
XRCC1P18887 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
XRCC1P18887 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
XRCC1P18887 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
XRCC1P18887 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
XRCC1P18887 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC1P18887 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC1P18887 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
XRCC1P18887 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC1P18887 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC1P18887 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
XRCC1P18887 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC1P18887 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC1P18887 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
XRCC1P18887 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC1P18887 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC1P18887 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC1P18887 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC1P18887 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC1P18887 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.55■□□□□ 0.08
XRCC1P18887 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC1P18887 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC1P18887 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.55■□□□□ 0.08
XRCC1P18887 AL353779.1-201ENST00000434793 351 ntBASIC15.55■□□□□ 0.08
XRCC1P18887 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
XRCC1P18887 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.55■□□□□ 0.08
XRCC1P18887 SPDYE22P-201ENST00000582158 798 ntBASIC15.55■□□□□ 0.08
XRCC1P18887 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.55■□□□□ 0.08
XRCC1P18887 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC1P18887 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC1P18887 AC027307.3-201ENST00000594262 1100 ntBASIC15.55■□□□□ 0.08
XRCC1P18887 SRD5A3P1-201ENST00000603021 949 ntBASIC15.55■□□□□ 0.08
XRCC1P18887 AC074044.1-201ENST00000609673 707 ntBASIC15.55■□□□□ 0.08
XRCC1P18887 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.55■□□□□ 0.08
XRCC1P18887 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.55■□□□□ 0.08
XRCC1P18887 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC1P18887 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC1P18887 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
XRCC1P18887 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
XRCC1P18887 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.55■□□□□ 0.08
XRCC1P18887 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.55■□□□□ 0.08
XRCC1P18887 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC1P18887 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC1P18887 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC1P18887 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC1P18887 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.55■□□□□ 0.08
XRCC1P18887 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.55■□□□□ 0.08
XRCC1P18887 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC1P18887 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
XRCC1P18887 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.54■□□□□ 0.08
XRCC1P18887 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.54■□□□□ 0.08
XRCC1P18887 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
XRCC1P18887 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC1P18887 CICP23-201ENST00000605013 2741 ntBASIC15.54■□□□□ 0.08
XRCC1P18887 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.54■□□□□ 0.08
XRCC1P18887 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
XRCC1P18887 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
XRCC1P18887 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.54■□□□□ 0.08
XRCC1P18887 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC1P18887 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC1P18887 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC1P18887 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC1P18887 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC1P18887 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
XRCC1P18887 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC1P18887 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.54■□□□□ 0.08
XRCC1P18887 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.54■□□□□ 0.08
XRCC1P18887 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.54■□□□□ 0.08
XRCC1P18887 DOC2GP-202ENST00000514950 1163 ntBASIC15.54■□□□□ 0.08
XRCC1P18887 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.54■□□□□ 0.08
XRCC1P18887 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC1P18887 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.54■□□□□ 0.08
XRCC1P18887 AC104794.3-201ENST00000566840 1248 ntBASIC15.54■□□□□ 0.08
XRCC1P18887 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.54■□□□□ 0.08
XRCC1P18887 AL662799.1-202ENST00000614205 422 ntBASIC15.54■□□□□ 0.08
XRCC1P18887 AF228730.6-201ENST00000641497 218 ntBASIC15.54■□□□□ 0.08
XRCC1P18887 AC084121.3-201ENST00000641716 218 ntBASIC15.54■□□□□ 0.08
XRCC1P18887 AC105233.6-201ENST00000642093 218 ntBASIC15.54■□□□□ 0.08
XRCC1P18887 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
XRCC1P18887 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC1P18887 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.54■□□□□ 0.08
XRCC1P18887 AC007292.2-201ENST00000593524 1812 ntBASIC15.54■□□□□ 0.08
XRCC1P18887 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
XRCC1P18887 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms