Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ERCC2P18074 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ERCC2P18074 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.99■□□□□ 0.15
ERCC2P18074 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.99■□□□□ 0.15
ERCC2P18074 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.99■□□□□ 0.15
ERCC2P18074 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.99■□□□□ 0.15
ERCC2P18074 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.99■□□□□ 0.15
ERCC2P18074 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.99■□□□□ 0.15
ERCC2P18074 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.99■□□□□ 0.15
ERCC2P18074 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
ERCC2P18074 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.99■□□□□ 0.15
ERCC2P18074 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ERCC2P18074 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
ERCC2P18074 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
ERCC2P18074 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.99■□□□□ 0.15
ERCC2P18074 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
ERCC2P18074 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ERCC2P18074 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.99■□□□□ 0.15
ERCC2P18074 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
ERCC2P18074 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ERCC2P18074 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
ERCC2P18074 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.98■□□□□ 0.15
ERCC2P18074 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.98■□□□□ 0.15
ERCC2P18074 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
ERCC2P18074 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ERCC2P18074 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
ERCC2P18074 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
ERCC2P18074 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ERCC2P18074 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ERCC2P18074 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ERCC2P18074 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ERCC2P18074 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ERCC2P18074 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
ERCC2P18074 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ERCC2P18074 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ERCC2P18074 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
ERCC2P18074 MEP1AP4-201ENST00000423244 1087 ntBASIC15.98■□□□□ 0.15
ERCC2P18074 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
ERCC2P18074 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
ERCC2P18074 FAM207CP-201ENST00000443486 507 ntBASIC15.98■□□□□ 0.15
ERCC2P18074 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ERCC2P18074 RN7SL399P-201ENST00000471648 279 ntBASIC15.98■□□□□ 0.15
ERCC2P18074 AC093004.1-201ENST00000508850 424 ntBASIC15.98■□□□□ 0.15
ERCC2P18074 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.98■□□□□ 0.15
ERCC2P18074 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.98■□□□□ 0.15
ERCC2P18074 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
ERCC2P18074 AC036164.1-201ENST00000570544 333 ntBASIC15.98■□□□□ 0.15
ERCC2P18074 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.98■□□□□ 0.15
ERCC2P18074 RN7SL204P-201ENST00000582831 262 ntBASIC15.98■□□□□ 0.15
ERCC2P18074 LINC02560-201ENST00000596379 459 ntBASIC15.98■□□□□ 0.15
ERCC2P18074 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
ERCC2P18074 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ERCC2P18074 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
ERCC2P18074 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ERCC2P18074 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ERCC2P18074 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ERCC2P18074 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ERCC2P18074 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
ERCC2P18074 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ERCC2P18074 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
ERCC2P18074 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.97■□□□□ 0.15
ERCC2P18074 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ERCC2P18074 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
ERCC2P18074 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ERCC2P18074 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ERCC2P18074 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.97■□□□□ 0.15
ERCC2P18074 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.97■□□□□ 0.15
ERCC2P18074 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
ERCC2P18074 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ERCC2P18074 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ERCC2P18074 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ERCC2P18074 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
ERCC2P18074 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.97■□□□□ 0.15
ERCC2P18074 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.97■□□□□ 0.15
ERCC2P18074 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ERCC2P18074 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ERCC2P18074 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ERCC2P18074 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ERCC2P18074 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
ERCC2P18074 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
ERCC2P18074 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
ERCC2P18074 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
ERCC2P18074 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ERCC2P18074 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ERCC2P18074 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ERCC2P18074 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ERCC2P18074 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ERCC2P18074 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ERCC2P18074 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.97■□□□□ 0.15
ERCC2P18074 AC236430.1-201ENST00000402231 743 ntBASIC15.97■□□□□ 0.15
ERCC2P18074 HMGN1P19-201ENST00000436976 333 ntBASIC15.97■□□□□ 0.15
ERCC2P18074 AC002472.2-201ENST00000442739 958 ntBASIC15.97■□□□□ 0.15
ERCC2P18074 FAM86LP-201ENST00000478302 853 ntBASIC15.97■□□□□ 0.15
ERCC2P18074 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
ERCC2P18074 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.97■□□□□ 0.15
ERCC2P18074 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.97■□□□□ 0.15
ERCC2P18074 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
ERCC2P18074 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ERCC2P18074 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.97■□□□□ 0.15
ERCC2P18074 AC008761.3-201ENST00000624803 892 ntBASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms