Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN1P18031 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.43■□□□□ 0.22
PTPN1P18031 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PTPN1P18031 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.43■□□□□ 0.22
PTPN1P18031 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN1P18031 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.43■□□□□ 0.22
PTPN1P18031 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN1P18031 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN1P18031 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.43■□□□□ 0.22
PTPN1P18031 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN1P18031 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN1P18031 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN1P18031 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.43■□□□□ 0.22
PTPN1P18031 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN1P18031 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PTPN1P18031 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN1P18031 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN1P18031 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.42■□□□□ 0.22
PTPN1P18031 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN1P18031 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
PTPN1P18031 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.42■□□□□ 0.22
PTPN1P18031 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN1P18031 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN1P18031 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN1P18031 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN1P18031 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN1P18031 AC087481.3-201ENST00000602886 1894 ntBASIC16.42■□□□□ 0.22
PTPN1P18031 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN1P18031 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN1P18031 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN1P18031 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN1P18031 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.42■□□□□ 0.22
PTPN1P18031 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN1P18031 TMEM14DP-201ENST00000422205 345 ntBASIC16.42■□□□□ 0.22
PTPN1P18031 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.42■□□□□ 0.22
PTPN1P18031 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.42■□□□□ 0.22
PTPN1P18031 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.42■□□□□ 0.22
PTPN1P18031 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN1P18031 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.42■□□□□ 0.22
PTPN1P18031 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN1P18031 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.42■□□□□ 0.22
PTPN1P18031 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.42■□□□□ 0.22
PTPN1P18031 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN1P18031 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.42■□□□□ 0.22
PTPN1P18031 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PTPN1P18031 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN1P18031 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN1P18031 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN1P18031 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN1P18031 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN1P18031 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN1P18031 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.41■□□□□ 0.22
PTPN1P18031 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN1P18031 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN1P18031 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN1P18031 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.41■□□□□ 0.22
PTPN1P18031 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PTPN1P18031 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.41■□□□□ 0.22
PTPN1P18031 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN1P18031 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PTPN1P18031 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN1P18031 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN1P18031 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PTPN1P18031 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN1P18031 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN1P18031 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PTPN1P18031 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN1P18031 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN1P18031 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.41■□□□□ 0.22
PTPN1P18031 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.41■□□□□ 0.22
PTPN1P18031 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN1P18031 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.41■□□□□ 0.22
PTPN1P18031 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN1P18031 AP001582.1-201ENST00000525856 295 ntBASIC16.41■□□□□ 0.22
PTPN1P18031 TDH-203ENST00000531764 1110 ntBASIC16.41■□□□□ 0.22
PTPN1P18031 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN1P18031 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN1P18031 AP001063.1-201ENST00000568332 529 ntBASIC16.41■□□□□ 0.22
PTPN1P18031 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PTPN1P18031 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.41■□□□□ 0.22
PTPN1P18031 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN1P18031 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN1P18031 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
PTPN1P18031 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN1P18031 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN1P18031 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.41■□□□□ 0.22
PTPN1P18031 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN1P18031 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN1P18031 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN1P18031 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN1P18031 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN1P18031 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN1P18031 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PTPN1P18031 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN1P18031 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN1P18031 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN1P18031 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN1P18031 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.4■□□□□ 0.22
PTPN1P18031 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.4■□□□□ 0.22
PTPN1P18031 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms