Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAP43P17677 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GAP43P17677 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.1■□□□□ 0.33
GAP43P17677 AC067930.6-201ENST00000623257 4947 ntBASIC17.1■□□□□ 0.33
GAP43P17677 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.1■□□□□ 0.33
GAP43P17677 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAP43P17677 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAP43P17677 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAP43P17677 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GAP43P17677 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.1■□□□□ 0.33
GAP43P17677 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.1■□□□□ 0.33
GAP43P17677 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GAP43P17677 AC236430.1-201ENST00000402231 743 ntBASIC17.1■□□□□ 0.33
GAP43P17677 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.1■□□□□ 0.33
GAP43P17677 AL353779.1-201ENST00000434793 351 ntBASIC17.1■□□□□ 0.33
GAP43P17677 AC026410.3-201ENST00000514280 936 ntBASIC17.1■□□□□ 0.33
GAP43P17677 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.1■□□□□ 0.33
GAP43P17677 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.1■□□□□ 0.33
GAP43P17677 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.1■□□□□ 0.33
GAP43P17677 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
GAP43P17677 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.1■□□□□ 0.33
GAP43P17677 BRI3BPP1-201ENST00000594224 787 ntBASIC17.1■□□□□ 0.33
GAP43P17677 AL662799.1-202ENST00000614205 422 ntBASIC17.1■□□□□ 0.33
GAP43P17677 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.1■□□□□ 0.33
GAP43P17677 WASH3P-207ENST00000560956 1394 ntBASIC17.1■□□□□ 0.33
GAP43P17677 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAP43P17677 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.1■□□□□ 0.33
GAP43P17677 DRD5P1-201ENST00000456605 1438 ntBASIC17.1■□□□□ 0.33
GAP43P17677 AC007541.1-201ENST00000570282 1469 ntBASIC17.1■□□□□ 0.33
GAP43P17677 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.1■□□□□ 0.33
GAP43P17677 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GAP43P17677 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAP43P17677 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAP43P17677 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.1■□□□□ 0.33
GAP43P17677 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAP43P17677 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAP43P17677 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAP43P17677 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.1■□□□□ 0.33
GAP43P17677 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
GAP43P17677 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
GAP43P17677 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.1■□□□□ 0.33
GAP43P17677 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.1■□□□□ 0.33
GAP43P17677 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
GAP43P17677 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
GAP43P17677 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.09■□□□□ 0.33
GAP43P17677 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAP43P17677 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.09■□□□□ 0.33
GAP43P17677 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAP43P17677 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAP43P17677 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.09■□□□□ 0.33
GAP43P17677 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAP43P17677 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAP43P17677 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.09■□□□□ 0.33
GAP43P17677 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.09■□□□□ 0.33
GAP43P17677 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAP43P17677 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.09■□□□□ 0.33
GAP43P17677 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.09■□□□□ 0.33
GAP43P17677 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.09■□□□□ 0.33
GAP43P17677 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.09■□□□□ 0.33
GAP43P17677 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.09■□□□□ 0.33
GAP43P17677 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
GAP43P17677 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
GAP43P17677 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.09■□□□□ 0.33
GAP43P17677 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.09■□□□□ 0.33
GAP43P17677 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GAP43P17677 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GAP43P17677 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAP43P17677 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
GAP43P17677 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.09■□□□□ 0.33
GAP43P17677 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.09■□□□□ 0.33
GAP43P17677 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAP43P17677 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
GAP43P17677 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAP43P17677 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
GAP43P17677 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GAP43P17677 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.09■□□□□ 0.33
GAP43P17677 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAP43P17677 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAP43P17677 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAP43P17677 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAP43P17677 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
GAP43P17677 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GAP43P17677 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GAP43P17677 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GAP43P17677 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
GAP43P17677 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.08■□□□□ 0.33
GAP43P17677 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
GAP43P17677 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GAP43P17677 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.08■□□□□ 0.33
GAP43P17677 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
GAP43P17677 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
GAP43P17677 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.08■□□□□ 0.33
GAP43P17677 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
GAP43P17677 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GAP43P17677 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GAP43P17677 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.32
GAP43P17677 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GAP43P17677 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GAP43P17677 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GAP43P17677 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms