Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC130P13994 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CCDC130P13994 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC130P13994 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC130P13994 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CCDC130P13994 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC130P13994 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC130P13994 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC130P13994 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC130P13994 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC130P13994 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC130P13994 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC130P13994 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC130P13994 RPL13AP25-201ENST00000484130 612 ntBASIC16.45■□□□□ 0.22
CCDC130P13994 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.45■□□□□ 0.22
CCDC130P13994 AC132938.2-201ENST00000579188 680 ntBASIC16.45■□□□□ 0.22
CCDC130P13994 AL033527.5-201ENST00000641382 801 ntBASIC16.45■□□□□ 0.22
CCDC130P13994 AL591163.1-201ENST00000641757 987 ntBASIC16.45■□□□□ 0.22
CCDC130P13994 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
CCDC130P13994 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC130P13994 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC130P13994 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CCDC130P13994 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC130P13994 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC130P13994 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CCDC130P13994 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC130P13994 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC130P13994 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC130P13994 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC130P13994 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC130P13994 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC130P13994 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CCDC130P13994 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC130P13994 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC130P13994 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC130P13994 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC130P13994 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC130P13994 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC130P13994 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC130P13994 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC130P13994 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC130P13994 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CCDC130P13994 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC130P13994 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC130P13994 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC130P13994 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC130P13994 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC130P13994 C1QBPP1-201ENST00000400117 770 ntBASIC16.44■□□□□ 0.22
CCDC130P13994 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
CCDC130P13994 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC130P13994 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC130P13994 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.44■□□□□ 0.22
CCDC130P13994 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC130P13994 RN7SL837P-201ENST00000463010 287 ntBASIC16.44■□□□□ 0.22
CCDC130P13994 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.44■□□□□ 0.22
CCDC130P13994 AC026410.3-201ENST00000514280 936 ntBASIC16.44■□□□□ 0.22
CCDC130P13994 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC130P13994 AC133539.2-201ENST00000604757 467 ntBASIC16.44■□□□□ 0.22
CCDC130P13994 IGHV3-72-202ENST00000621503 303 ntBASIC16.44■□□□□ 0.22
CCDC130P13994 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC130P13994 AL035252.4-201ENST00000624174 288 ntBASIC16.44■□□□□ 0.22
CCDC130P13994 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CCDC130P13994 AC092384.3-202ENST00000564646 2873 ntBASIC16.44■□□□□ 0.22
CCDC130P13994 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC130P13994 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC130P13994 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC130P13994 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC130P13994 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC130P13994 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC130P13994 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC130P13994 CU639417.3-201ENST00000624240 1404 ntBASIC16.44■□□□□ 0.22
CCDC130P13994 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC130P13994 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC130P13994 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC130P13994 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC130P13994 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC130P13994 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC130P13994 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.44■□□□□ 0.22
CCDC130P13994 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC130P13994 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CCDC130P13994 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC130P13994 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC130P13994 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.43■□□□□ 0.22
CCDC130P13994 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CCDC130P13994 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CCDC130P13994 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC130P13994 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC130P13994 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC130P13994 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.43■□□□□ 0.22
CCDC130P13994 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CCDC130P13994 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.43■□□□□ 0.22
CCDC130P13994 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
CCDC130P13994 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC130P13994 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
CCDC130P13994 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CCDC130P13994 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC130P13994 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.43■□□□□ 0.22
CCDC130P13994 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC130P13994 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.43■□□□□ 0.22
CCDC130P13994 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms