Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LAMP1P11279 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LAMP1P11279 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.76□□□□□ -0.05
LAMP1P11279 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LAMP1P11279 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LAMP1P11279 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LAMP1P11279 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LAMP1P11279 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LAMP1P11279 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LAMP1P11279 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LAMP1P11279 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LAMP1P11279 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.76□□□□□ -0.05
LAMP1P11279 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.76□□□□□ -0.05
LAMP1P11279 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.76□□□□□ -0.05
LAMP1P11279 SERBP1P3-201ENST00000459980 809 ntBASIC14.76□□□□□ -0.05
LAMP1P11279 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.76□□□□□ -0.05
LAMP1P11279 AC109322.1-201ENST00000524499 1264 ntBASIC14.76□□□□□ -0.05
LAMP1P11279 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
LAMP1P11279 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LAMP1P11279 SNHG9-202ENST00000564014 471 ntBASIC14.76□□□□□ -0.05
LAMP1P11279 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
LAMP1P11279 AL596442.2-201ENST00000610240 980 ntBASIC14.76□□□□□ -0.05
LAMP1P11279 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.76□□□□□ -0.05
LAMP1P11279 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.76□□□□□ -0.05
LAMP1P11279 AF228730.6-201ENST00000641497 218 ntBASIC14.76□□□□□ -0.05
LAMP1P11279 AC084121.3-201ENST00000641716 218 ntBASIC14.76□□□□□ -0.05
LAMP1P11279 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LAMP1P11279 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LAMP1P11279 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LAMP1P11279 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.76□□□□□ -0.05
LAMP1P11279 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
LAMP1P11279 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LAMP1P11279 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LAMP1P11279 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LAMP1P11279 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
LAMP1P11279 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.76□□□□□ -0.05
LAMP1P11279 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.76□□□□□ -0.05
LAMP1P11279 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LAMP1P11279 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LAMP1P11279 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LAMP1P11279 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.75□□□□□ -0.05
LAMP1P11279 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
LAMP1P11279 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LAMP1P11279 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.75□□□□□ -0.05
LAMP1P11279 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.75□□□□□ -0.05
LAMP1P11279 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
LAMP1P11279 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.75□□□□□ -0.05
LAMP1P11279 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LAMP1P11279 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LAMP1P11279 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LAMP1P11279 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LAMP1P11279 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LAMP1P11279 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LAMP1P11279 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LAMP1P11279 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LAMP1P11279 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LAMP1P11279 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LAMP1P11279 FAM45BP-202ENST00000592932 1624 ntBASIC14.75□□□□□ -0.05
LAMP1P11279 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LAMP1P11279 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.75□□□□□ -0.05
LAMP1P11279 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LAMP1P11279 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
LAMP1P11279 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LAMP1P11279 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
LAMP1P11279 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LAMP1P11279 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.75□□□□□ -0.05
LAMP1P11279 HLA-J-203ENST00000494367 1087 ntBASIC14.75□□□□□ -0.05
LAMP1P11279 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.75□□□□□ -0.05
LAMP1P11279 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.75□□□□□ -0.05
LAMP1P11279 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LAMP1P11279 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.75□□□□□ -0.05
LAMP1P11279 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LAMP1P11279 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
LAMP1P11279 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LAMP1P11279 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
LAMP1P11279 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LAMP1P11279 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
LAMP1P11279 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LAMP1P11279 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
LAMP1P11279 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
LAMP1P11279 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
LAMP1P11279 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
LAMP1P11279 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
LAMP1P11279 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LAMP1P11279 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LAMP1P11279 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LAMP1P11279 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.75□□□□□ -0.05
LAMP1P11279 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.75□□□□□ -0.05
LAMP1P11279 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LAMP1P11279 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.74□□□□□ -0.05
LAMP1P11279 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LAMP1P11279 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.74□□□□□ -0.05
LAMP1P11279 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
LAMP1P11279 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LAMP1P11279 WASH3P-207ENST00000560956 1394 ntBASIC14.74□□□□□ -0.05
LAMP1P11279 FO538757.1-201ENST00000623083 1397 ntBASIC14.74□□□□□ -0.05
LAMP1P11279 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LAMP1P11279 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
LAMP1P11279 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LAMP1P11279 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms