Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC12.19□□□□□ -0.46
CD28P10747 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
CD28P10747 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD28P10747 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD28P10747 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CD28P10747 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CD28P10747 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CD28P10747 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD28P10747 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD28P10747 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
CD28P10747 AC093525.8-201ENST00000624099 1342 ntBASIC12.19□□□□□ -0.46
CD28P10747 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC12.19□□□□□ -0.46
CD28P10747 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD28P10747 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD28P10747 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CD28P10747 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC12.19□□□□□ -0.46
CD28P10747 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD28P10747 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CD28P10747 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
CD28P10747 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CD28P10747 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD28P10747 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.19□□□□□ -0.46
CD28P10747 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CD28P10747 AL355864.2-201ENST00000447420 863 ntBASIC12.19□□□□□ -0.46
CD28P10747 AC022494.1-201ENST00000466044 728 ntBASIC12.19□□□□□ -0.46
CD28P10747 KRT18P43-201ENST00000469825 1281 ntBASIC12.19□□□□□ -0.46
CD28P10747 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.19□□□□□ -0.46
CD28P10747 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC12.19□□□□□ -0.46
CD28P10747 AP001889.1-201ENST00000525414 633 ntBASIC12.19□□□□□ -0.46
CD28P10747 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CD28P10747 CLUHP6-201ENST00000580789 941 ntBASIC12.19□□□□□ -0.46
CD28P10747 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.19□□□□□ -0.46
CD28P10747 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC12.19□□□□□ -0.46
CD28P10747 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.19□□□□□ -0.46
CD28P10747 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CD28P10747 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD28P10747 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
CD28P10747 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CD28P10747 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD28P10747 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD28P10747 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
CD28P10747 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CD28P10747 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD28P10747 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CD28P10747 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.19□□□□□ -0.46
CD28P10747 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CD28P10747 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD28P10747 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD28P10747 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD28P10747 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CD28P10747 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD28P10747 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CD28P10747 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.18□□□□□ -0.46
CD28P10747 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CD28P10747 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.18□□□□□ -0.46
CD28P10747 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CD28P10747 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD28P10747 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CD28P10747 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD28P10747 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.18□□□□□ -0.46
CD28P10747 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CD28P10747 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD28P10747 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
CD28P10747 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CD28P10747 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC12.18□□□□□ -0.46
CD28P10747 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
CD28P10747 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.18□□□□□ -0.46
CD28P10747 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD28P10747 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD28P10747 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC12.18□□□□□ -0.46
CD28P10747 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
CD28P10747 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CD28P10747 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.18□□□□□ -0.46
CD28P10747 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD28P10747 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD28P10747 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.18□□□□□ -0.46
CD28P10747 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC12.18□□□□□ -0.46
CD28P10747 AC005229.1-201ENST00000392885 409 ntBASIC12.18□□□□□ -0.46
CD28P10747 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.18□□□□□ -0.46
CD28P10747 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.18□□□□□ -0.46
CD28P10747 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.18□□□□□ -0.46
CD28P10747 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.18□□□□□ -0.46
CD28P10747 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CD28P10747 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.18□□□□□ -0.46
CD28P10747 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.18□□□□□ -0.46
CD28P10747 AC009486.1-201ENST00000569860 813 ntBASIC12.18□□□□□ -0.46
CD28P10747 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.18□□□□□ -0.46
CD28P10747 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.18□□□□□ -0.46
CD28P10747 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC12.18□□□□□ -0.46
CD28P10747 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD28P10747 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CD28P10747 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.18□□□□□ -0.46
CD28P10747 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC12.18□□□□□ -0.46
CD28P10747 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CD28P10747 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD28P10747 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD28P10747 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC12.18□□□□□ -0.46
CD28P10747 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
CD28P10747 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CD28P10747 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms