Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
MMP2P08253 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
MMP2P08253 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.59■□□□□ 0.09
MMP2P08253 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.59■□□□□ 0.09
MMP2P08253 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
MMP2P08253 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
MMP2P08253 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
MMP2P08253 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
MMP2P08253 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
MMP2P08253 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.58■□□□□ 0.09
MMP2P08253 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
MMP2P08253 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
MMP2P08253 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MMP2P08253 AL138799.1-201ENST00000448213 1675 ntBASIC15.58■□□□□ 0.08
MMP2P08253 AC006058.4-201ENST00000624016 1670 ntBASIC15.58■□□□□ 0.08
MMP2P08253 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MMP2P08253 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.58■□□□□ 0.08
MMP2P08253 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
MMP2P08253 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.58■□□□□ 0.08
MMP2P08253 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.58■□□□□ 0.08
MMP2P08253 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MMP2P08253 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
MMP2P08253 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
MMP2P08253 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.58■□□□□ 0.08
MMP2P08253 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.58■□□□□ 0.08
MMP2P08253 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.58■□□□□ 0.08
MMP2P08253 CRB3P1-201ENST00000449338 276 ntBASIC15.58■□□□□ 0.08
MMP2P08253 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.58■□□□□ 0.08
MMP2P08253 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.58■□□□□ 0.08
MMP2P08253 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.58■□□□□ 0.08
MMP2P08253 AC104596.2-201ENST00000512793 793 ntBASIC15.58■□□□□ 0.08
MMP2P08253 AL359711.2-201ENST00000563105 872 ntBASIC15.58■□□□□ 0.08
MMP2P08253 TP53TG3HP-202ENST00000569755 579 ntBASIC15.58■□□□□ 0.08
MMP2P08253 SAMD11P1-201ENST00000571429 661 ntBASIC15.58■□□□□ 0.08
MMP2P08253 AC140912.1-201ENST00000577171 1054 ntBASIC15.58■□□□□ 0.08
MMP2P08253 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
MMP2P08253 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.58■□□□□ 0.08
MMP2P08253 AC093525.8-201ENST00000624099 1342 ntBASIC15.58■□□□□ 0.08
MMP2P08253 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
MMP2P08253 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
MMP2P08253 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MMP2P08253 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MMP2P08253 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MMP2P08253 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MMP2P08253 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.58■□□□□ 0.08
MMP2P08253 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.58■□□□□ 0.08
MMP2P08253 REXO1L2P-201ENST00000425429 2069 ntBASIC15.58■□□□□ 0.08
MMP2P08253 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MMP2P08253 TNRC18P2-201ENST00000417666 2714 ntBASIC15.58■□□□□ 0.08
MMP2P08253 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MMP2P08253 AC007787.1-201ENST00000588095 1583 ntBASIC15.58■□□□□ 0.08
MMP2P08253 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MMP2P08253 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP2P08253 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP2P08253 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MMP2P08253 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MMP2P08253 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.57■□□□□ 0.08
MMP2P08253 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP2P08253 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP2P08253 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP2P08253 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MMP2P08253 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP2P08253 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
MMP2P08253 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP2P08253 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP2P08253 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP2P08253 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP2P08253 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
MMP2P08253 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MMP2P08253 AC134915.1-201ENST00000426461 574 ntBASIC15.57■□□□□ 0.08
MMP2P08253 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MMP2P08253 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.57■□□□□ 0.08
MMP2P08253 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP2P08253 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.57■□□□□ 0.08
MMP2P08253 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.57■□□□□ 0.08
MMP2P08253 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.57■□□□□ 0.08
MMP2P08253 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.57■□□□□ 0.08
MMP2P08253 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.57■□□□□ 0.08
MMP2P08253 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.57■□□□□ 0.08
MMP2P08253 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.57■□□□□ 0.08
MMP2P08253 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.57■□□□□ 0.08
MMP2P08253 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP2P08253 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.57■□□□□ 0.08
MMP2P08253 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.57■□□□□ 0.08
MMP2P08253 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.57■□□□□ 0.08
MMP2P08253 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP2P08253 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP2P08253 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MMP2P08253 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
MMP2P08253 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.57■□□□□ 0.08
MMP2P08253 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MMP2P08253 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP2P08253 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
MMP2P08253 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
MMP2P08253 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
MMP2P08253 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.57■□□□□ 0.08
MMP2P08253 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP2P08253 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.57■□□□□ 0.08
MMP2P08253 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MMP2P08253 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms