Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.71■□□□□ 0.27
TUBB4AP04350 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TUBB4AP04350 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.71■□□□□ 0.27
TUBB4AP04350 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.71■□□□□ 0.27
TUBB4AP04350 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.71■□□□□ 0.27
TUBB4AP04350 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
TUBB4AP04350 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TUBB4AP04350 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.71■□□□□ 0.27
TUBB4AP04350 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.71■□□□□ 0.27
TUBB4AP04350 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.71■□□□□ 0.27
TUBB4AP04350 AC097359.3-201ENST00000603982 1210 ntBASIC16.71■□□□□ 0.27
TUBB4AP04350 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.71■□□□□ 0.27
TUBB4AP04350 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.71■□□□□ 0.27
TUBB4AP04350 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.71■□□□□ 0.27
TUBB4AP04350 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TUBB4AP04350 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.71■□□□□ 0.27
TUBB4AP04350 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.71■□□□□ 0.27
TUBB4AP04350 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.71■□□□□ 0.27
TUBB4AP04350 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TUBB4AP04350 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
TUBB4AP04350 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TUBB4AP04350 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TUBB4AP04350 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TUBB4AP04350 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TUBB4AP04350 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.71■□□□□ 0.27
TUBB4AP04350 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
TUBB4AP04350 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TUBB4AP04350 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TUBB4AP04350 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
TUBB4AP04350 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
TUBB4AP04350 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TUBB4AP04350 KRT8P37-201ENST00000451609 1420 ntBASIC16.7■□□□□ 0.26
TUBB4AP04350 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TUBB4AP04350 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TUBB4AP04350 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TUBB4AP04350 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
TUBB4AP04350 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC16.7■□□□□ 0.26
TUBB4AP04350 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TUBB4AP04350 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TUBB4AP04350 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TUBB4AP04350 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
TUBB4AP04350 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TUBB4AP04350 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TUBB4AP04350 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TUBB4AP04350 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TUBB4AP04350 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TUBB4AP04350 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TUBB4AP04350 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.7■□□□□ 0.26
TUBB4AP04350 AL450487.1-201ENST00000426799 995 ntBASIC16.7■□□□□ 0.26
TUBB4AP04350 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TUBB4AP04350 AC098859.1-201ENST00000502915 1238 ntBASIC16.7■□□□□ 0.26
TUBB4AP04350 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
TUBB4AP04350 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.7■□□□□ 0.26
TUBB4AP04350 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.7■□□□□ 0.26
TUBB4AP04350 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.7■□□□□ 0.26
TUBB4AP04350 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.7■□□□□ 0.26
TUBB4AP04350 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TUBB4AP04350 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.7■□□□□ 0.26
TUBB4AP04350 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.7■□□□□ 0.26
TUBB4AP04350 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TUBB4AP04350 CICP11-201ENST00000434745 2827 ntBASIC16.7■□□□□ 0.26
TUBB4AP04350 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TUBB4AP04350 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TUBB4AP04350 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TUBB4AP04350 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TUBB4AP04350 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TUBB4AP04350 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TUBB4AP04350 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TUBB4AP04350 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.7■□□□□ 0.26
TUBB4AP04350 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TUBB4AP04350 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TUBB4AP04350 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TUBB4AP04350 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TUBB4AP04350 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TUBB4AP04350 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.7■□□□□ 0.26
TUBB4AP04350 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TUBB4AP04350 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TUBB4AP04350 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.7■□□□□ 0.26
TUBB4AP04350 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.69■□□□□ 0.26
TUBB4AP04350 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.69■□□□□ 0.26
TUBB4AP04350 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TUBB4AP04350 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TUBB4AP04350 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
TUBB4AP04350 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.69■□□□□ 0.26
TUBB4AP04350 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC16.69■□□□□ 0.26
TUBB4AP04350 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TUBB4AP04350 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TUBB4AP04350 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TUBB4AP04350 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TUBB4AP04350 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TUBB4AP04350 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TUBB4AP04350 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
TUBB4AP04350 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TUBB4AP04350 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TUBB4AP04350 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TUBB4AP04350 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.69■□□□□ 0.26
TUBB4AP04350 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.69■□□□□ 0.26
TUBB4AP04350 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TUBB4AP04350 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TUBB4AP04350 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms