Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDGFAP04085 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
PDGFAP04085 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.63□□□□□ -0.07
PDGFAP04085 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDGFAP04085 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.63□□□□□ -0.07
PDGFAP04085 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFAP04085 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
PDGFAP04085 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFAP04085 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFAP04085 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.62□□□□□ -0.07
PDGFAP04085 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.62□□□□□ -0.07
PDGFAP04085 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
PDGFAP04085 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFAP04085 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFAP04085 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
PDGFAP04085 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFAP04085 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFAP04085 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFAP04085 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFAP04085 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFAP04085 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFAP04085 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.62□□□□□ -0.07
PDGFAP04085 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFAP04085 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFAP04085 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.62□□□□□ -0.07
PDGFAP04085 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.62□□□□□ -0.07
PDGFAP04085 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFAP04085 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.62□□□□□ -0.07
PDGFAP04085 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.62□□□□□ -0.07
PDGFAP04085 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.62□□□□□ -0.07
PDGFAP04085 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
PDGFAP04085 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.62□□□□□ -0.07
PDGFAP04085 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
PDGFAP04085 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFAP04085 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.62□□□□□ -0.07
PDGFAP04085 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.62□□□□□ -0.07
PDGFAP04085 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.62□□□□□ -0.07
PDGFAP04085 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.62□□□□□ -0.07
PDGFAP04085 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.62□□□□□ -0.07
PDGFAP04085 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.62□□□□□ -0.07
PDGFAP04085 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.62□□□□□ -0.07
PDGFAP04085 AL365330.1-201ENST00000607459 531 ntBASIC14.62□□□□□ -0.07
PDGFAP04085 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFAP04085 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.62□□□□□ -0.07
PDGFAP04085 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFAP04085 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.62□□□□□ -0.07
PDGFAP04085 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFAP04085 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFAP04085 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.62□□□□□ -0.07
PDGFAP04085 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.62□□□□□ -0.07
PDGFAP04085 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFAP04085 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFAP04085 TUBB1P2-201ENST00000422712 1306 ntBASIC14.62□□□□□ -0.07
PDGFAP04085 TUBB1P1-201ENST00000503144 1300 ntBASIC14.62□□□□□ -0.07
PDGFAP04085 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFAP04085 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFAP04085 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFAP04085 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
PDGFAP04085 AC006058.4-201ENST00000624016 1670 ntBASIC14.61□□□□□ -0.07
PDGFAP04085 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.61□□□□□ -0.07
PDGFAP04085 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFAP04085 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFAP04085 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.61□□□□□ -0.07
PDGFAP04085 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
PDGFAP04085 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.61□□□□□ -0.07
PDGFAP04085 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFAP04085 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.61□□□□□ -0.07
PDGFAP04085 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFAP04085 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFAP04085 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFAP04085 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFAP04085 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.61□□□□□ -0.07
PDGFAP04085 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
PDGFAP04085 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.61□□□□□ -0.07
PDGFAP04085 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.61□□□□□ -0.07
PDGFAP04085 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFAP04085 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFAP04085 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFAP04085 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFAP04085 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.61□□□□□ -0.07
PDGFAP04085 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.61□□□□□ -0.07
PDGFAP04085 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.61□□□□□ -0.07
PDGFAP04085 AL355994.2-201ENST00000447882 704 ntBASIC14.61□□□□□ -0.07
PDGFAP04085 FAM86LP-201ENST00000478302 853 ntBASIC14.61□□□□□ -0.07
PDGFAP04085 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.61□□□□□ -0.07
PDGFAP04085 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.61□□□□□ -0.07
PDGFAP04085 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.61□□□□□ -0.07
PDGFAP04085 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.61□□□□□ -0.07
PDGFAP04085 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.61□□□□□ -0.07
PDGFAP04085 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.61□□□□□ -0.07
PDGFAP04085 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.61□□□□□ -0.07
PDGFAP04085 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFAP04085 BRI3BPP1-201ENST00000594224 787 ntBASIC14.61□□□□□ -0.07
PDGFAP04085 AL022328.1-201ENST00000610050 478 ntBASIC14.61□□□□□ -0.07
PDGFAP04085 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC14.61□□□□□ -0.07
PDGFAP04085 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFAP04085 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFAP04085 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFAP04085 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFAP04085 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms