Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
NKX2-2O95096 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.32□□□□□ -0.12
NKX2-2O95096 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-2O95096 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.32□□□□□ -0.12
NKX2-2O95096 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-2O95096 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-2O95096 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.32□□□□□ -0.12
NKX2-2O95096 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-2O95096 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.32□□□□□ -0.12
NKX2-2O95096 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-2O95096 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-2O95096 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
NKX2-2O95096 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.32□□□□□ -0.12
NKX2-2O95096 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
NKX2-2O95096 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-2O95096 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.32□□□□□ -0.12
NKX2-2O95096 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.32□□□□□ -0.12
NKX2-2O95096 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.32□□□□□ -0.12
NKX2-2O95096 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-2O95096 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NKX2-2O95096 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-2O95096 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-2O95096 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.32□□□□□ -0.12
NKX2-2O95096 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NKX2-2O95096 GNAQP1-201ENST00000444815 1067 ntBASIC14.32□□□□□ -0.12
NKX2-2O95096 SPTLC1P1-201ENST00000447199 261 ntBASIC14.32□□□□□ -0.12
NKX2-2O95096 AC093004.1-201ENST00000508850 424 ntBASIC14.32□□□□□ -0.12
NKX2-2O95096 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.32□□□□□ -0.12
NKX2-2O95096 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.32□□□□□ -0.12
NKX2-2O95096 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
NKX2-2O95096 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.32□□□□□ -0.12
NKX2-2O95096 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.32□□□□□ -0.12
NKX2-2O95096 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-2O95096 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.32□□□□□ -0.12
NKX2-2O95096 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-2O95096 ZBED1P1-201ENST00000502364 1930 ntBASIC14.32□□□□□ -0.12
NKX2-2O95096 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.32□□□□□ -0.12
NKX2-2O95096 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-2O95096 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-2O95096 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
NKX2-2O95096 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-2O95096 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-2O95096 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-2O95096 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-2O95096 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-2O95096 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-2O95096 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-2O95096 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-2O95096 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-2O95096 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-2O95096 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-2O95096 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-2O95096 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-2O95096 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-2O95096 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
NKX2-2O95096 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.32□□□□□ -0.12
NKX2-2O95096 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NKX2-2O95096 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-2O95096 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.31□□□□□ -0.12
NKX2-2O95096 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.31□□□□□ -0.12
NKX2-2O95096 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.31□□□□□ -0.12
NKX2-2O95096 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-2O95096 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
NKX2-2O95096 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-2O95096 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.31□□□□□ -0.12
NKX2-2O95096 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.31□□□□□ -0.12
NKX2-2O95096 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
NKX2-2O95096 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-2O95096 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-2O95096 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-2O95096 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-2O95096 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.31□□□□□ -0.12
NKX2-2O95096 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
NKX2-2O95096 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-2O95096 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-2O95096 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-2O95096 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-2O95096 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.31□□□□□ -0.12
NKX2-2O95096 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NKX2-2O95096 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.31□□□□□ -0.12
NKX2-2O95096 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.31□□□□□ -0.12
NKX2-2O95096 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-2O95096 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.31□□□□□ -0.12
NKX2-2O95096 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-2O95096 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.31□□□□□ -0.12
NKX2-2O95096 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.31□□□□□ -0.12
NKX2-2O95096 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.31□□□□□ -0.12
NKX2-2O95096 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.31□□□□□ -0.12
NKX2-2O95096 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.31□□□□□ -0.12
NKX2-2O95096 AC099568.2-201ENST00000609194 695 ntBASIC14.31□□□□□ -0.12
NKX2-2O95096 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.31□□□□□ -0.12
NKX2-2O95096 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-2O95096 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-2O95096 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-2O95096 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NKX2-2O95096 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.31□□□□□ -0.12
NKX2-2O95096 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-2O95096 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.31□□□□□ -0.12
NKX2-2O95096 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NKX2-2O95096 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms